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scnpilot_expt_750_bf_scaffold_472_10

Organism: SCNPILOT_EXPT_750_BF_Plasmid_62_88

RP 0 / 55 BSCG 0 / 51 ASCG 0 / 38
Location: 4183..6180

Top 3 Functional Annotations

Value Algorithm Source
Type IV secretion system, TraD, DNA-binding domain protein n=3 Tax=Burkholderiales RepID=F4GGS9_ALIDK similarity UNIREF
DB: UNIREF100
  • Identity: 98.9
  • Coverage: 665.0
  • Bit_score: 1304
  • Evalue 0.0
  • rbh
Type IV conjugative transfer system coupling protein TraD {ECO:0000313|EMBL:EGY61034.1}; TaxID=658080 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstoni similarity UNIPROT
DB: UniProtKB
  • Identity: 98.9
  • Coverage: 665.0
  • Bit_score: 1304
  • Evalue 0.0
type IV secretion system protein TraD similarity KEGG
DB: KEGG
  • Identity: 98.9
  • Coverage: 665.0
  • Bit_score: 1304
  • Evalue 0.0

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Taxonomy

Ralstonia sp. 5_2_56FAA → Ralstonia → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1998
ATGGCAAAGAGAGAGGAAAAGGGGAGTGCGGGCAGCTTCTCCCGTGGGGCCGAGTTGTGGATGCACCAAGCCCGGCTGTTCGTGGTGGCGATCTGGACGGTCGTGCTGATTTCCATCCTGGCCGGCTTGGGCGTGACTACCGCCTACTTCTGGAATGCGACGACGGCGGACGAAAAGTACGCGCTGGAGCGGAACGTCCTGGCGCACACGCGGGATGCGCTCTACATGACGGCCGGAAAGATGGAGCTGAACGTCAACGGCGAGCTGCGCAAGATGGAGGTGTCGGAGGTTGCTTTGCTGACCGACGACATGGCCGAGGATGCTTGGCGAAAGCTGCGCAACGGCGGCATGTTCGGTTTGCTGACTTCCATCGGTGTGGTGTTTCTGATCTCTTTGTACTGGTGGGGCTACGGCCGCGAAAGGATGCAGGACAACCAACTGCGCGGGGCCAAACTGGTGGAAGGAAAAGAGCTTGCGCGCCTGATCCGACACCGCGACGAGGCAAGCCCTTATGAGATTGCAGGCGTGCCCATGCGCGTGAAGTCGGAGACGCTGCACACGCTGTTTGCCGGCGCACAGGGTACGGGTAAGTCACAGCAGTTTTTCGCACTCATGAAGCAGGTGCGGGCGCGTGGCAAGCGGATGATCGTGTATGACCCGACCGGCGAGTTCACCCAAGCGTTCTACCGTGAAGGCAAAGACATCCTGATGAATCCGCTGGACTCCAGAAGCCCGAACTGGAACATCTGGAACGAAATCGCCAAGGACTACCACTTCGACAACATGGCGAACGGCCTGATCCCCGATCCGGCCGAGTCCGATCCATTTTGGGCACTTGCTGGCCGGATGGTGCTCAAGGACGTGATCGCAGTATTGGGGCGCGAGGGCCGCCGCACGAACCGCGACCTCTACAACGCTATTGCCAAGAGCAACCTGGACGCCATGCACGCATTGTTGCAGGGAACGGCAGGGGCGACCTATGTTGACCCAACGACCGAGCGCACGGGGATGTCGCTCAAGATGACGGTTCAGAACCAGCTCGAAGCCTTCCGGTTTTTGCCAGATGAAGGTGAATCGTTCTCCATCCGCAAGTGGGTGCATGAGGAAGGCGATTCATGGATGTTCATCACAGCACGGGAGGCGATGCGCGAGGCATTGAAGCCCGTTTTGTCGTTGTGGATCGACACGGCAATCAAGGCCGTACTCGACCTGGAGCCGATCCACCGCGAGCGGCTTTGGTTTTGCATTGACGAGCTGCCGACGCTCCAGAAACTGGACATCCTGAAGCTGGCTCTGACGAATACCAGAAAGTACGGTTTGTGCATGGTGCTGGGCGTGCAAGACTTCAGCCAGCTTTACGAAATCTACGGGCACGATCTGGCCAAGACGATCATTTCCGGGTGCCAGACGAAGCTGCTGCTGCGTGTAACGGATGGGGCTGCGGCGAAGCTGTTGGCCGAATTGATGGGGCAGGCCGAGGTAGATGAAAAGGATGAAACCTTGAGCTACGGCCTCAGTTCGCAGCGTGACGGAGTGAGCGTTATGGCGCGCCGACAGATGCGCGACCTTGTACTGACATCGGAGATTTTGACGTTGCCCGACATGACCGGCTACCTGCTGGTTCCGGGCGACTATCCCATTGCCCGTGTCAAGTACGGCTACGTTCCGACCGAGAAACAAGCCAACGGTTTCATCGAGCGCGACGGCTTTGCGATCAGCTTCAAACCGACCACGGCCGCCGCCGCGCCGGCACCCGCTCAGGCGACCGCCGAAGTTCATCAGCAACCCGCACCGGAGCAAGGCGACATGCTGGATGATGACGATATGGACGCTCCGGCTACGGTGGAGGTTATGCGCAACGAAAACGGTGATGTGATCGACAAGGCGACCGGCGAAATCATCAAGCCGGCCGAGAAGGTTTCGCGCGCGAAAGACGATGCAGATGCGAAATCAGCCGGCCAAGGTAAGAAACCCAACCCGCTGGCGGATGCGCTATAG
PROTEIN sequence
Length: 666
MAKREEKGSAGSFSRGAELWMHQARLFVVAIWTVVLISILAGLGVTTAYFWNATTADEKYALERNVLAHTRDALYMTAGKMELNVNGELRKMEVSEVALLTDDMAEDAWRKLRNGGMFGLLTSIGVVFLISLYWWGYGRERMQDNQLRGAKLVEGKELARLIRHRDEASPYEIAGVPMRVKSETLHTLFAGAQGTGKSQQFFALMKQVRARGKRMIVYDPTGEFTQAFYREGKDILMNPLDSRSPNWNIWNEIAKDYHFDNMANGLIPDPAESDPFWALAGRMVLKDVIAVLGREGRRTNRDLYNAIAKSNLDAMHALLQGTAGATYVDPTTERTGMSLKMTVQNQLEAFRFLPDEGESFSIRKWVHEEGDSWMFITAREAMREALKPVLSLWIDTAIKAVLDLEPIHRERLWFCIDELPTLQKLDILKLALTNTRKYGLCMVLGVQDFSQLYEIYGHDLAKTIISGCQTKLLLRVTDGAAAKLLAELMGQAEVDEKDETLSYGLSSQRDGVSVMARRQMRDLVLTSEILTLPDMTGYLLVPGDYPIARVKYGYVPTEKQANGFIERDGFAISFKPTTAAAAPAPAQATAEVHQQPAPEQGDMLDDDDMDAPATVEVMRNENGDVIDKATGEIIKPAEKVSRAKDDADAKSAGQGKKPNPLADAL*