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scnpilot_expt_750_bf_scaffold_472

Search features with annotation key words

Displaying items 1-30 of 76 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_bf_scaffold_472_1
Ralstonia sp. 5_2_56FAA, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

175..504
DNA (330bp) protein (110aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1WDH7_ACISJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EGY61042.1}; TaxID=658080 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia sp. 5_2_56F
scnpilot_expt_750_bf_scaffold_472_2
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

519..845
DNA (327bp) protein (109aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1WDH6_ACISJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABM44301.1}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain
scnpilot_expt_750_bf_scaffold_472_3
Ralstonia sp. 5_2_56FAA, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

858..1094
DNA (237bp) protein (79aa)
Uncharacterized protein n=3 Tax=Burkholderiales RepID=F4GH12_ALIDK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EGY61040.1}; TaxID=658080 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia sp. 5_2_56F
scnpilot_expt_750_bf_scaffold_472_4
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1102..1719
DNA (618bp) protein (206aa)
Resolvase, N-terminal domain n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1WDH4_ACISJ rbh
resolvase domain-containing protein
Resolvase, N-terminal domain {ECO:0000313|EMBL:ABM44299.1}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (s
scnpilot_expt_750_bf_scaffold_472_5
unknown

Not on your lists

comp(1587..2372)
DNA (786bp) protein (262aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_472_6
Ralstonia sp. 5_2_56FAA, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2357..2578)
DNA (222bp) protein (74aa)
Uncharacterized protein n=3 Tax=Burkholderiales RepID=F4GH14_ALIDK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EGY61038.1}; TaxID=658080 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia sp. 5_2_56F
scnpilot_expt_750_bf_scaffold_472_7
Ralstonia sp. 5_2_56FAA, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2584..3174)
DNA (591bp) protein (197aa)
Uncharacterized protein n=1 Tax=Ralstonia sp. 5_2_56FAA RepID=U3G7M9_9RALS rbh
Uncharacterized protein {ECO:0000313|EMBL:EGY61037.1}; TaxID=658080 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia sp. 5_2_56F
hypothetical protein rbh
scnpilot_expt_750_bf_scaffold_472_8
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3171..3491)
DNA (321bp) protein (107aa)
Uncharacterized protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4GH16_ALIDK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEB87136.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus den
scnpilot_expt_750_bf_scaffold_472_9
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3804..4181
DNA (378bp) protein (126aa)
Uncharacterized protein n=4 Tax=Burkholderiales RepID=A1WDH1_ACISJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABM44296.1}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain
scnpilot_expt_750_bf_scaffold_472_10
Ralstonia sp. 5_2_56FAA, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4183..6180
DNA (1998bp) protein (666aa)
Type IV secretion system, TraD, DNA-binding domain protein n=3 Tax=Burkholderiales RepID=F4GGS9_ALIDK rbh
Type IV conjugative transfer system coupling protein TraD {ECO:0000313|EMBL:EGY61034.1}; TaxID=658080 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstoni
type IV secretion system protein TraD
scnpilot_expt_750_bf_scaffold_472_11
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6192..6647
DNA (456bp) protein (152aa)
Putative thiol:disulfide interchange transmembrane protein n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1WDG9_ACISJ
putative thiol:disulfide interchange transmembrane protein
Putative thiol:disulfide interchange transmembrane protein {ECO:0000313|EMBL:ABM44294.1}; Flags: Precursor;; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamo
scnpilot_expt_750_bf_scaffold_472_12
Ralstonia sp. 5_2_56FAA, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6644..9529
DNA (2886bp) protein (962aa)
Conjugative relaxase domain protein n=2 Tax=Ralstonia RepID=E2T5M9_9RALS rbh
Conjugative relaxase domain-containing protein {ECO:0000313|EMBL:EGY61032.1}; TaxID=658080 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source
TrwC protein rbh
scnpilot_expt_750_bf_scaffold_472_13
Ralstonia sp. 5_2_56FAA, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9695..9883
DNA (189bp) protein (63aa)
Uncharacterized protein n=2 Tax=Burkholderiales RepID=F4GGT2_ALIDK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EGY61031.1}; TaxID=658080 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia sp. 5_2_56F
scnpilot_expt_750_bf_scaffold_472_14
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9974..10828
DNA (855bp) protein (285aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1WDG7_ACISJ rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ABM44292.1}; Flags: Precursor;; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Aci
scnpilot_expt_750_bf_scaffold_472_15
Ralstonia sp. 5_2_56FAA, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10860..11135
DNA (276bp) protein (92aa)
Uncharacterized protein n=3 Tax=Burkholderiales RepID=F4GGT4_ALIDK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EGY61029.1}; TaxID=658080 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia sp. 5_2_56F
scnpilot_expt_750_bf_scaffold_472_16
Ralstonia sp. 5_2_56FAA, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11177..12112
DNA (936bp) protein (312aa)
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1WDG5_ACISJ rbh
integral membrane sensor signal transduction histidine kinase
Uncharacterized protein {ECO:0000313|EMBL:EGY61028.1}; TaxID=658080 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia sp. 5_2_56F
scnpilot_expt_750_bf_scaffold_472_17
Ralstonia sp. 5_2_56FAA, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12081..12791)
DNA (711bp) protein (237aa)
Two component transcriptional regulator, LuxR family n=4 Tax=Burkholderiales RepID=A1WDG4_ACISJ rbh
two component LuxR family transcriptional regulator
Uncharacterized protein {ECO:0000313|EMBL:EGY61027.1}; TaxID=658080 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia sp. 5_2_56F
scnpilot_expt_750_bf_scaffold_472_18
Ralstonia sp. 5_2_56FAA, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13226..13726
DNA (501bp) protein (167aa)
Lytic transglycosylase, catalytic n=3 Tax=Burkholderiales RepID=A1WDG3_ACISJ rbh
lytic transglycosylase, catalytic rbh
Uncharacterized protein {ECO:0000313|EMBL:EGY61026.1}; TaxID=658080 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia sp. 5_2_56F
scnpilot_expt_750_bf_scaffold_472_19
Ralstonia sp. 5_2_56FAA, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13728..14111
DNA (384bp) protein (128aa)
Uncharacterized protein n=3 Tax=Burkholderiales RepID=A1WDG2_ACISJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EGY61025.1}; TaxID=658080 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia sp. 5_2_56F
scnpilot_expt_750_bf_scaffold_472_20
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14206..14538
DNA (333bp) protein (111aa)
Uncharacterized protein n=4 Tax=Burkholderiales RepID=A1WDG1_ACISJ
Conjugal transfer protein TrbC
Uncharacterized protein {ECO:0000313|EMBL:ABM44286.1}; Flags: Precursor;; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Aci
scnpilot_expt_750_bf_scaffold_472_21
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14554..14847
DNA (294bp) protein (98aa)
TraL n=4 Tax=Burkholderiales RepID=A1WDG0_ACISJ
hypothetical protein
TraL {ECO:0000313|EMBL:ABM44285.1}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
scnpilot_expt_750_bf_scaffold_472_22
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14863..15456
DNA (594bp) protein (198aa)
Uncharacterized protein n=4 Tax=Burkholderiales RepID=A1WDF9_ACISJ rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABM44284.1}; Flags: Precursor;; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Aci
scnpilot_expt_750_bf_scaffold_472_23
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15566..16129
DNA (564bp) protein (188aa)
Uncharacterized protein n=2 Tax=Burkholderiales RepID=F4GGU2_ALIDK rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABM44283.1}; Flags: Precursor;; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Aci
scnpilot_expt_750_bf_scaffold_472_24
Ralstonia sp. 5_2_56FAA, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16122..17471
DNA (1350bp) protein (450aa)
TraB pilus assembly family protein n=4 Tax=Burkholderiales RepID=A1WDF7_ACISJ rbh
conjugation TrbI family protein
Uncharacterized protein {ECO:0000313|EMBL:EGY61020.1}; TaxID=658080 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia sp. 5_2_56F
scnpilot_expt_750_bf_scaffold_472_25
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17464..18213
DNA (750bp) protein (250aa)
Protein-disulfide isomerase n=4 Tax=Burkholderiales RepID=A1WDF6_ACISJ rbh
disulfide bond isomerase, DsbC/G
Protein-disulfide isomerase {ECO:0000313|EMBL:ABM44281.1}; Flags: Precursor;; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source=
scnpilot_expt_750_bf_scaffold_472_26
Ralstonia sp. 5_2_56FAA, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18210..18359
DNA (150bp) protein (50aa)
Uncharacterized protein n=2 Tax=Burkholderiales RepID=F4GGU5_ALIDK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EGY61018.1}; TaxID=658080 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia sp. 5_2_56F
scnpilot_expt_750_bf_scaffold_472_27
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18356..19006
DNA (651bp) protein (217aa)
Type IV conjugative transfer system protein TraV n=3 Tax=Burkholderiales RepID=F4GGU6_ALIDK rbh
type IV conjugative transfer system protein TraV
Type IV conjugative transfer system protein TraV {ECO:0000313|EMBL:AEB87066.1}; Flags: Precursor;; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae;
scnpilot_expt_750_bf_scaffold_472_28
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19044..21668
DNA (2625bp) protein (875aa)
Type-IV secretion system protein TraC n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4GGU7_ALIDK rbh
Type-IV secretion system protein TraC {ECO:0000313|EMBL:AEB87067.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alic
type-IV secretion system protein TraC
scnpilot_expt_750_bf_scaffold_472_29
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21658..22086
DNA (429bp) protein (143aa)
Uncharacterized protein n=2 Tax=Comamonadaceae RepID=A1WDF3_ACISJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABM44278.1}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain
scnpilot_expt_750_bf_scaffold_472_30
Ralstonia sp. 5_2_56FAA, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22086..22562
DNA (477bp) protein (159aa)
Uncharacterized protein n=4 Tax=Burkholderiales RepID=A1WDF2_ACISJ rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EGY61014.1}; TaxID=658080 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia sp. 5_2_56F
Displaying items 1-30 of 76 in total

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