ggKbase home page

SCNpilot_cont_500_bf_scaffold_413

Search features with annotation key words

Displaying items 1-30 of 153 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_413_1
unknown

Not on your lists

66..272
DNA (207bp) protein (69aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_413_2
Streptomyces sp. 150FB, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(486..1304)
DNA (819bp) protein (273aa)
DNA replication protein n=1 Tax=Saccharomonospora marina XMU15 RepID=H5X761_9PSEU rbh
ATPase AAA {ECO:0000313|EMBL:KIF72825.1}; TaxID=1576605 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. 150FB.;"
IstB domain-containing protein ATP-binding protein rbh
SCNpilot_cont_500_bf_scaffold_413_3
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1301..2599)
DNA (1299bp) protein (433aa)
Integrase catalytic region n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CJX8_PSEUX rbh
integrase catalytic subunit rbh
Integrase catalytic region {ECO:0000313|EMBL:AEA27003.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_500_bf_scaffold_413_4
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3271..3897
DNA (627bp) protein (209aa)
Uncharacterized protein n=1 Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2BF69_STRRD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACZ88227.1}; TaxID=479432 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;"
SCNpilot_cont_500_bf_scaffold_413_5
unknown

Not on your lists

4154..4459
DNA (306bp) protein (102aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_413_6
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4688..5524)
DNA (837bp) protein (279aa)
Prolipoprotein diacylglyceryl transferase {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117220}; EC=2.4.99.- {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117311};; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
Prolipoprotein diacylglyceryl transferase n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8X7H0_NAKMY
prolipoprotein diacylglyceryl transferase
SCNpilot_cont_500_bf_scaffold_413_7
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5977..6201)
DNA (225bp) protein (75aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F2L6M9_PSEUX
hypothetical protein; K08982 putative membrane protein
Uncharacterized protein {ECO:0000313|EMBL:AEA28923.1}; Flags: Precursor;; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_500_bf_scaffold_413_8
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6201..6629)
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F2L6N0_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA28924.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_500_bf_scaffold_413_9
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6712..7506)
DNA (795bp) protein (265aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F2L6N1_PSEUX
hypothetical protein; K07090
Uncharacterized protein {ECO:0000313|EMBL:AEA28925.1}; Flags: Precursor;; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_500_bf_scaffold_413_10
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7595..8977)
DNA (1383bp) protein (461aa)
Beta-lactamase domain protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F2L6N2_PSEUX
beta-lactamase domain-containing protein
Beta-lactamase domain protein {ECO:0000313|EMBL:AEA28926.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_500_bf_scaffold_413_11
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9037..9291)
DNA (255bp) protein (85aa)
Rhodanese-like protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F2L6N3_PSEUX
Rhodanese-like protein
Sulfurtransferase {ECO:0000256|RuleBase:RU000507}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_500_bf_scaffold_413_12
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9456..9719)
DNA (264bp) protein (88aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F2L6N4_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA28928.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_500_bf_scaffold_413_13
Streptomyces sp. AA4, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10613..11005
DNA (393bp) protein (131aa)
chemotaxis protein CheY n=1 Tax=Amycolatopsis benzoatilytica RepID=UPI00036E0488
Phosphate regulon transcriptional regulatory protein PhoB {ECO:0000313|EMBL:EFL09858.1}; TaxID=591158 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. AA4.;"
winged helix family two component transcriptional regulator
SCNpilot_cont_500_bf_scaffold_413_14
Saccharomonospora glauca, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11175..12710)
DNA (1536bp) protein (512aa)
Putative multicopper oxidase n=1 Tax=Saccharomonospora glauca K62 RepID=I1D4E6_9PSEU
Putative multicopper oxidase {ECO:0000313|EMBL:EIE99820.1}; Flags: Precursor;; TaxID=928724 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora glauca K62.;"
oxidase (copper-binding protein)
SCNpilot_cont_500_bf_scaffold_413_15
unknown

Not on your lists

comp(12772..13278)
DNA (507bp) protein (169aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_413_16
Amycolatopsis azurea, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13549..14175
DNA (627bp) protein (209aa)
hypothetical protein n=1 Tax=Amycolatopsis alba RepID=UPI00036A4CF2
Uncharacterized protein {ECO:0000313|EMBL:EMD22790.1}; TaxID=1238180 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis azurea DSM 43854.;"
Ferredoxin
SCNpilot_cont_500_bf_scaffold_413_17
Frankia sp. EuI1c, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14180..14545
DNA (366bp) protein (122aa)
Uncharacterized protein n=1 Tax=Frankia sp. CN3 RepID=G6HG35_9ACTO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADP84809.1}; TaxID=298654 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EuI1c).;"
SCNpilot_cont_500_bf_scaffold_413_18
Kutzneria sp. 744, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14542..15861
DNA (1320bp) protein (440aa)
Ferredoxin--NAD(+) reductase n=1 Tax=Frankia sp. CN3 RepID=G6HG34_9ACTO rbh
Ferredoxin reductase {ECO:0000313|EMBL:EWM13084.1}; TaxID=345341 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria sp. 744.;"
FAD-dependent pyridine nucleotide-disulfide oxidoreductase rbh
SCNpilot_cont_500_bf_scaffold_413_19
Streptomyces sp. HPH0547, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15938..16636)
DNA (699bp) protein (233aa)
phosphatidic acid phosphatase n=1 Tax=Arthrobacter sp. 161MFSha2.1 RepID=UPI00036CCCFF
membrane-associated acid phosphatase
Uncharacterized protein {ECO:0000313|EMBL:EPD94002.1}; TaxID=1203592 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. HPH0547.;"
SCNpilot_cont_500_bf_scaffold_413_20
Frankia sp. CcI6, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16706..18037)
DNA (1332bp) protein (444aa)
UPI0003D010FC related cluster n=1 Tax=unknown RepID=UPI0003D010FC rbh
Uncharacterized protein {ECO:0000313|EMBL:ETA03477.1}; TaxID=1352929 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. CcI6.;"
major facilitator transporter rbh
SCNpilot_cont_500_bf_scaffold_413_21
Modestobacter multiseptatus, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18128..18853)
DNA (726bp) protein (242aa)
hypothetical protein n=1 Tax=Actinomycetospora chiangmaiensis RepID=UPI000374F705
transglycosylase
Putative Transglycosylase {ECO:0000313|EMBL:CCH89494.1}; TaxID=1144889 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter marinus (strain BC501).;"
SCNpilot_cont_500_bf_scaffold_413_22
Streptomyces sp. e14, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19164..19559
DNA (396bp) protein (132aa)
CopY family transcriptional repressor n=1 Tax=Streptomyces sp. e14 RepID=D6KGW9_9ACTO
CopY family transcriptional repressor {ECO:0000313|EMBL:EFF88153.2}; TaxID=645465 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. e14.;"
CopY family transcriptional regulator
SCNpilot_cont_500_bf_scaffold_413_23
Actinoplanes sp. SE50/110, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19600..20511
DNA (912bp) protein (304aa)
HtpX-like protease protein (EC:3.4.24.-)
HtpX-like probable protease protein {ECO:0000313|EMBL:AEV84279.1}; EC=3.4.24.- {ECO:0000313|EMBL:AEV84279.1};; TaxID=134676 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes sp. (strain ATCC 31044 / CBS 674.73 / SE50/110).;"
HtpX-like probable protease protein n=1 Tax=Actinoplanes sp. (strain ATCC 31044 / CBS 674.73 / SE50/110) RepID=G8SHM1_ACTS5
SCNpilot_cont_500_bf_scaffold_413_24
Mycobacterium tuberculosis, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20580..21584)
DNA (1005bp) protein (335aa)
Undecaprenyl-diphosphatase {ECO:0000256|HAMAP-Rule:MF_01006}; EC=3.6.1.27 {ECO:0000256|HAMAP-Rule:MF_01006};; Bacitracin resistance protein {ECO:0000256|HAMAP-Rule:MF_01006}; Undecaprenyl pyrophosphate phosphatase {ECO:0000256|HAMAP-Rule:MF_01006}; TaxID=1324261 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex.;" source="Mycobacterium tuberculosis TKK-01-0051.;"
undecaprenyl pyrophosphate phosphatase; K06153 undecaprenyl-diphosphatase [EC:3.6.1.27] rbh
hypothetical protein n=1 Tax=Actinomycetospora chiangmaiensis RepID=UPI000368D02E rbh
SCNpilot_cont_500_bf_scaffold_413_25
unknown

Not on your lists

21767..22183
DNA (417bp) protein (139aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_413_26
Streptomyces fradiae, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22275..23180
DNA (906bp) protein (302aa)
Integral membrane protein n=1 Tax=Streptomyces sp. e14 RepID=D6K8F3_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:KDS86270.1}; TaxID=1906 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces fradiae (Streptomyces roseoflavus).;"
Integral membrane protein
SCNpilot_cont_500_bf_scaffold_413_27
Saccharopolyspora erythraea, Saccharopolyspora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23248..23712)
DNA (465bp) protein (155aa)
MerR family transcriptional regulator n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFF085
molybdate ABC molybdate transporter substrate-binding protein
MerR family transcriptional regulator {ECO:0000313|EMBL:EQD86347.1}; TaxID=1382595 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.;" source="Saccharopolyspora erythraea D.;"
SCNpilot_cont_500_bf_scaffold_413_28
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23754..24218)
DNA (465bp) protein (155aa)
glyoxalase n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFED50
glyoxalase/bleomycin resistance protein/dioxygenase
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:AEA23170.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_500_bf_scaffold_413_29
Streptomyces sp. AA4, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24294..24671
DNA (378bp) protein (126aa)
hypothetical protein n=1 Tax=Actinomycetospora chiangmaiensis RepID=UPI0003619828
ArsR family transcriptional regulator {ECO:0000313|EMBL:EFL05247.1}; TaxID=591158 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. AA4.;"
arsR; ArsR family transcriptional regulator; K03892 ArsR family transcriptional regulator
SCNpilot_cont_500_bf_scaffold_413_30
Saccharomonospora azurea, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24668..25735
DNA (1068bp) protein (356aa)
arsenic transporter n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFED52
Arsenical-resistance protein {ECO:0000313|EMBL:EHY88490.1}; Flags: Precursor;; TaxID=882081 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora azurea NA-128.;"
arsenical-resistance protein; K03325 arsenite transporter, ACR3 family
Displaying items 1-30 of 153 in total

View Taxonomy