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scnpilot_solids2_trim150_scaffold_2940

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Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_2940_1
unknown

Not on your lists

2..220
DNA (219bp) protein (73aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_2940_2

Not on your lists

comp(214..387)
DNA (174bp) protein (58aa)
Uncharacterized protein {ECO:0000313|EMBL:KKN92005.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_2940_3
Methylobacterium oryzae, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(423..761)
DNA (339bp) protein (113aa)
DNA transfer agent orfg10 n=1 Tax=Methylobacterium sp. GXF4 RepID=I9LF04_9RHIZ
Gene transfer agent {ECO:0000313|EMBL:AIQ93430.1}; TaxID=693986 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium oryzae CBMB20.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_2940_4
Hoeflea sp. BAL378, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(767..1177)
DNA (411bp) protein (137aa)
tail protein n=1 Tax=Methylosinus sp. LW4 RepID=UPI0003706A5B
Tail protein {ECO:0000313|EMBL:KGF67447.1}; TaxID=1547437 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. BAL378.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_2940_5
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1383..1802)
DNA (420bp) protein (140aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002E28A12
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIM25482.1}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
scnpilot_solids2_trim150_scaffold_2940_6
Methylocystis sp. SC2, Methylocystis, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1807..2388)
DNA (582bp) protein (194aa)
hypothetical protein n=1 Tax=Methylosinus sp. LW4 RepID=UPI000365F3D3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCJ06936.1}; TaxID=187303 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylocystaceae; Methylocystis.;" source="Methylocystis sp. (strain SC2).;"
scnpilot_solids2_trim150_scaffold_2940_7
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2489..3205
DNA (717bp) protein (239aa)
peptidase S1 n=1 Tax=Xanthobacteraceae RepID=UPI0003793008
peptidase S1 and S6 chymotrypsin/Hap
Peptidase S1 and S6 chymotrypsin/Hap {ECO:0000313|EMBL:ADH88038.1}; Flags: Precursor;; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;"
scnpilot_solids2_trim150_scaffold_2940_8
unknown

Not on your lists

comp(3212..3532)
DNA (321bp) protein (107aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_2940_9
CSP1_5_NC10, NC10, Bacteria

Not on your lists

comp(3545..3820)
DNA (276bp) protein (92aa)
hypothetical protein n=1 Tax=Patulibacter americanus RepID=UPI0003B47F44
hypothetical protein
Tax=CSP1_5_NC10
scnpilot_solids2_trim150_scaffold_2940_10
unknown

Not on your lists

comp(3810..4241)
DNA (432bp) protein (144aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_2940_11
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4419..5648)
DNA (1230bp) protein (410aa)
capsid protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002DE6814 rbh
Phage major capsid protein, HK97 family {ECO:0000313|EMBL:EIM25487.1}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
Phage major capsid protein, HK97 family rbh
scnpilot_solids2_trim150_scaffold_2940_12
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5670..6302)
DNA (633bp) protein (211aa)
Phage prohead protease, HK97 family n=1 Tax=Microvirga sp. WSM3557 RepID=I4YNE7_9RHIZ
Phage prohead protease, HK97 family {ECO:0000313|EMBL:EIM25489.1}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
Phage prohead protease, HK97 family
scnpilot_solids2_trim150_scaffold_2940_13
unknown

Not on your lists

comp(6299..6535)
DNA (237bp) protein (79aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_2940_14
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6532..6726)
DNA (195bp) protein (65aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002D7FDEE
Uncharacterized protein {ECO:0000313|EMBL:EFI51555.1}; Flags: Precursor;; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
scnpilot_solids2_trim150_scaffold_2940_15
unknown

Not on your lists

6905..7138
DNA (234bp) protein (78aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_2940_16

Not on your lists

7278..7580
DNA (303bp) protein (101aa)
Marine sediment metagenome DNA, contig: S06H3_S14342 {ECO:0000313|EMBL:GAI38415.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
scnpilot_solids2_trim150_scaffold_2940_17
Microvirga aerilata, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7796..8038)
DNA (243bp) protein (81aa)
hypothetical protein n=1 Tax=Methylocystis rosea RepID=UPI000360EB0D
Uncharacterized protein {ECO:0000313|EMBL:KFG68933.1}; TaxID=670292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga aerilata.;"
scnpilot_solids2_trim150_scaffold_2940_18
unknown

Not on your lists

comp(8056..8322)
DNA (267bp) protein (89aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_2940_19
unknown

Not on your lists

comp(8333..8653)
DNA (321bp) protein (107aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_2940_20
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8856..10163)
DNA (1308bp) protein (436aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002E9F6A7 rbh
Phage portal protein, HK97 family {ECO:0000313|EMBL:EIM25492.1}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
HK97 family phage portal protein rbh
scnpilot_solids2_trim150_scaffold_2940_21
Azorhizobium caulinodans, Azorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10360..11622)
DNA (1263bp) protein (421aa)
Uncharacterized protein n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8HR25_AZOC5 rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:BAF87103.1}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / JCM 20966 /; NBRC 14845 / NCIMB 13405 / ORS 571).;"
scnpilot_solids2_trim150_scaffold_2940_22
unknown

Not on your lists

comp(11600..12181)
DNA (582bp) protein (194aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI000374623D
scnpilot_solids2_trim150_scaffold_2940_23
unknown

Not on your lists

comp(12355..12747)
DNA (393bp) protein (131aa)
hypothetical protein
scnpilot_solids2_trim150_scaffold_2940_24
Methylobacterium aquaticum, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12861..14096)
DNA (1236bp) protein (412aa)
von Willebrand factor type A n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HPL7_PARL1
TadG protein {ECO:0000313|EMBL:BAQ48114.1}; TaxID=270351 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium aquaticum.;"
von Willebrand factor type A
scnpilot_solids2_trim150_scaffold_2940_25
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14214..14717)
DNA (504bp) protein (168aa)
Uncharacterized conserved protein n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8HR19_AZOC5
UPF0260 protein FG93_01769 {ECO:0000256|HAMAP-Rule:MF_00676}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein; K09160 hypothetical protein
scnpilot_solids2_trim150_scaffold_2940_26
unknown

Not on your lists

comp(14810..14962)
DNA (153bp) protein (51aa)

This feature has no annotations

Displaying 26 items

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