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ACD85_1

Alias: ACD85_3487.45098.28

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Displaying items 1-30 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD85_1_1

Not on your lists

comp(1..90)
DNA (90bp) protein (30aa)
1..90 - (rbs_motif=None rbs_spacer=None)
Uncharacterized protein {ECO:0000313|EMBL:EKD22509.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD85_1_2

Not on your lists

102..794
DNA (693bp) protein (231aa)
N4 gp69-like protein {ECO:0000313|EMBL:EKD22510.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Uncharacterized protein n=1 Tax=Acinetobacter baumannii NIPH 1362 RepID=N8RP06_ACIBA
putative n4 gp69-like protein
Jill Banfield (11/16/12)
ACD85_1_3

Not on your lists

791..973
DNA (183bp) protein (61aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=9 to=30)
transmembrane_regions (db=TMHMM db_id=tmhmm from=34 to=56)
Uncharacterized protein {ECO:0000313|EMBL:EKD22511.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD85_1_4

Not on your lists

1023..1787
DNA (765bp) protein (255aa)
seg (db=Seg db_id=seg from=171 to=184)
Lysozyme-like (db=superfamily db_id=SSF53955 from=2 to=111 evalue=6.7e-21)
SLT (db=HMMPfam db_id=PF01464 from=19 to=111 evalue=5.3e-15 interpro_id=IPR008258 interpro_description=Lytic transglycosylase-like, catalytic)
no description (db=Gene3D db_id=G3DSA:1.10.530.10 from=5 to=136 evalue=3.7e-12)
ACD85_1_5

Not on your lists

1760..3397
DNA (1638bp) protein (546aa)
N4 gp68-like protein n=1 Tax=Pseudomonas phage LIT1 RepID=C8ZKU8_9CAUD (db=UNIREF evalue=0.0 bit_score=686.0 identity=66.07 coverage=92.1245421245421)
putative n4 gp68-like protein
seg (db=Seg db_id=seg from=408 to=420)
N4 gp68-like protein {ECO:0000313|EMBL:EKD22513.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD85_1_6

Not on your lists

3406..4095
DNA (690bp) protein (230aa)
seg (db=Seg db_id=seg from=16 to=29)
N4 gp67-like protein {ECO:0000313|EMBL:EKD22514.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Putative uncharacterized protein n=1 Tax=Enterobacter phage EcP1 RepID=E9NIJ0_9CAUD
ACD85_1_7

Not on your lists

4667..6826
DNA (2160bp) protein (720aa)
N4 gp59-like protein n=1 Tax=Pseudomonas phage LIT1 RepID=C8ZKU4_9CAUD (db=UNIREF evalue=0.0 bit_score=790.0 identity=55.19 coverage=95.5555555555556)
putative n4 gp59-like protein
coiled-coil (db=Coil db_id=coil from=251 to=279 evalue=NA)
seg (db=Seg db_id=seg from=153 to=164)
ACD85_1_8

Not on your lists

6913..7260
DNA (348bp) protein (116aa)
coiled-coil (db=Coil db_id=coil from=6 to=27 evalue=NA)
Uncharacterized protein {ECO:0000313|EMBL:EKD22508.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Uncharacterized protein n=2 Tax=unclassified dsDNA phages RepID=M4SL54_9VIRU
ACD85_1_9

Not on your lists

comp(7755..8216)
DNA (462bp) protein (154aa)
7755..8216 - (rbs_motif=None rbs_spacer=None)
Uncharacterized protein {ECO:0000313|EMBL:EKD22506.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD85_1_10

Not on your lists

8490..9656
DNA (1167bp) protein (389aa)
N4 gp56-like protein n=1 Tax=Pseudomonas phage LUZ7 RepID=C8ZKH8_9CAUD (db=UNIREF evalue=1.0e-145 bit_score=519.0 identity=64.78 coverage=99.2287917737789)
putative major coat protein rbh
seg (db=Seg db_id=seg from=293 to=303)
N4 gp56-like protein {ECO:0000313|EMBL:EKD22503.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD85_1_11

Not on your lists

9730..10299
DNA (570bp) protein (190aa)
N4 gp55-like protein {ECO:0000313|EMBL:EKD22504.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Uncharacterized protein n=1 Tax=Acinetobacter baumannii NIPH 1362 RepID=N8T315_ACIBA
ACD85_1_12

Not on your lists

10332..11030
DNA (699bp) protein (233aa)
N4 gp54-like protein n=1 Tax=Pseudomonas phage LUZ7 RepID=C8ZKH6_9CAUD (db=UNIREF evalue=7.0e-34 bit_score=147.0 identity=56.3 coverage=57.5107296137339)
seg (db=Seg db_id=seg from=75 to=88)
coiled-coil (db=Coil db_id=coil from=78 to=99 evalue=NA)
N4 gp54-like protein {ECO:0000313|EMBL:EKD22505.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD85_1_13

Not on your lists

11187..13391
DNA (2205bp) protein (735aa)
N4 gp53-like protein n=1 Tax=Pseudomonas phage LUZ7 RepID=C8ZKH5_9CAUD (db=UNIREF evalue=3.0e-87 bit_score=327.0 identity=30.52 coverage=96.734693877551)
seg (db=Seg db_id=seg from=538 to=550)
transmembrane_regions (db=TMHMM db_id=tmhmm from=591 to=613)
transmembrane_regions (db=TMHMM db_id=tmhmm from=557 to=576)
ACD85_1_14

Not on your lists

13395..13907
DNA (513bp) protein (171aa)
Pathogenesis-related transcriptional factor and ERF protein n=1 Tax=Hyphomicrobium denitrificans ATCC 51888 RepID=C6QJJ3_9RHIZ (db=UNIREF evalue=6.0e-32 bit_score=139.0 identity=45.34 coverage=92.9824561403509)
Pathogenesis-related transcriptional factor and ERF protein
His-Me finger endonucleases (db=superfamily db_id=SSF54060 from=9 to=110 evalue=9.7e-21)
DNA-binding domain (db=superfamily db_id=SSF54171 from=113 to=160 evalue=2.0e-06 interpro_id=IPR016177 interpro_description=DNA-binding, integrase-type GO=Molecular Function: DNA binding (GO:0003677))
ACD85_1_15

Not on your lists

13955..14455
DNA (501bp) protein (167aa)
N4 gp52-like protein n=1 Tax=Pseudomonas phage LUZ7 RepID=C8ZKH4_9CAUD (db=UNIREF evalue=2.0e-13 bit_score=78.2 identity=60.66 coverage=35.9281437125749)
seg (db=Seg db_id=seg from=15 to=30)
seg (db=Seg db_id=seg from=86 to=102)
N4 gp52-like protein {ECO:0000313|EMBL:EKD22491.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD85_1_16

Not on your lists

14513..14959
DNA (447bp) protein (149aa)
PROKAR_LIPOPROTEIN (db=ProfileScan db_id=PS51257 from=1 to=19 evalue=5.0)
Uncharacterized protein {ECO:0000313|EMBL:EKD22492.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD85_1_17

Not on your lists

14969..16423
DNA (1455bp) protein (485aa)
coiled-coil (db=Coil db_id=coil from=196 to=224 evalue=NA)
seg (db=Seg db_id=seg from=158 to=173)
Uncharacterized protein {ECO:0000313|EMBL:EKD22493.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD85_1_18

Not on your lists

16498..28236
DNA (11739bp) protein (3913aa)
N4 gp50-like protein n=1 Tax=Pseudomonas phage LUZ7 RepID=C8ZKH2_9CAUD (db=UNIREF evalue=0.0 bit_score=749.0 identity=34.17 coverage=36.2892921032456)
hypothetical protein
seg (db=Seg db_id=seg from=824 to=859)
seg (db=Seg db_id=seg from=1305 to=1326)
ACD85_1_19

Not on your lists

comp(28264..28551)
DNA (288bp) protein (96aa)
28264..28551 - (rbs_motif=GGA/GAG/AGG rbs_spacer=5-10bp)
Uncharacterized protein {ECO:0000313|EMBL:EKD22495.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD85_1_20

Not on your lists

comp(29204..29416)
DNA (213bp) protein (71aa)
seg (db=Seg db_id=seg from=18 to=31)
transmembrane_regions (db=TMHMM db_id=tmhmm from=34 to=56)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
Uncharacterized protein {ECO:0000313|EMBL:EKD22496.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD85_1_21

Not on your lists

comp(29424..29768)
DNA (345bp) protein (115aa)
seg (db=Seg db_id=seg from=65 to=81)
Uncharacterized protein {ECO:0000313|EMBL:EKD22497.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD85_1_22

Not on your lists

comp(29793..30248)
DNA (456bp) protein (152aa)
crossover junction endodeoxyribonuclease
Crossover junction endodeoxyribonuclease n=1 Tax=Salmonella phage epsilon15 RepID=Q858D2_BPE15 (db=UNIREF evalue=4.0e-25 bit_score=116.0 identity=54.62 coverage=84.2105263157895)
seg (db=Seg db_id=seg from=78 to=93)
seg (db=Seg db_id=seg from=135 to=151)
ACD85_1_23

Not on your lists

comp(30245..30580)
DNA (336bp) protein (112aa)
30245..30580 - (rbs_motif=AGGA rbs_spacer=5-10bp)
Uncharacterized protein {ECO:0000313|EMBL:EKD22499.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD85_1_24

Not on your lists

comp(30577..30972)
DNA (396bp) protein (132aa)
Probable gene 66 protein n=2 Tax=Ralstonia solanacearum RepID=A3RUR7_RALSO (db=UNIREF evalue=8.0e-39 bit_score=162.0 identity=71.68 coverage=82.5757575757576)
phage family protein
Putative gene 66 protein {ECO:0000313|EMBL:EKD22500.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD85_1_25

Not on your lists

comp(31034..31771)
DNA (738bp) protein (246aa)
seg (db=Seg db_id=seg from=18 to=30)
Single-stranded DNA-binding protein {ECO:0000313|EMBL:EKD22501.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Uncharacterized protein n=1 Tax=Acinetobacter baumannii NIPH 1362 RepID=N8T213_ACIBA
putative single-stranded DNA-binding protein
ACD85_1_26

Not on your lists

comp(31828..32553)
DNA (726bp) protein (242aa)
N4 gp44-like protein n=1 Tax=Pseudomonas phage LUZ7 RepID=C8ZKG3_9CAUD (db=UNIREF evalue=1.0e-81 bit_score=305.0 identity=59.43 coverage=99.1735537190083)
AAA domain protein
N4 gp44-like protein {ECO:0000313|EMBL:EKD22502.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Uncharacterized protein n=3 Tax=unclassified dsDNA phages RepID=M4SMM1_9VIRU
ACD85_1_27

Not on your lists

comp(33315..35459)
DNA (2145bp) protein (715aa)
N4 gp43-like protein n=1 Tax=Pseudomonas phage LIT1 RepID=C8ZKS4_9CAUD (db=UNIREF evalue=0.0 bit_score=789.0 identity=56.41 coverage=99.020979020979)
putative n4 gp43-like protein
seg (db=Seg db_id=seg from=281 to=296)
seg (db=Seg db_id=seg from=535 to=549)
ACD85_1_28

Not on your lists

comp(35474..36457)
DNA (984bp) protein (328aa)
N4 gp42-like protein n=1 Tax=Pseudomonas phage LUZ7 RepID=C8ZKG1_9CAUD (db=UNIREF evalue=5.0e-100 bit_score=367.0 identity=51.93 coverage=98.4756097560976)
PROKAR_LIPOPROTEIN (db=ProfileScan db_id=PS51257 from=1 to=20 evalue=5.0)
N4 gp42-like protein {ECO:0000313|EMBL:EKD22481.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Uncharacterized protein n=1 Tax=Acinetobacter baumannii NIPH 1362 RepID=N8T361_ACIBA
ACD85_1_29

Not on your lists

comp(36519..36914)
DNA (396bp) protein (132aa)
seg (db=Seg db_id=seg from=20 to=32)
Uncharacterized protein {ECO:0000313|EMBL:EKD22482.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD85_1_30

Not on your lists

comp(36920..37273)
DNA (354bp) protein (118aa)
Uncharacterized protein {ECO:0000313|EMBL:EKD22483.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Uncharacterized protein n=2 Tax=Caudovirales RepID=I7DJN4_9CAUD
Displaying items 1-30 of 38 in total

View Taxonomy