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F03_scaffold_13

Search features with annotation key words

Displaying items 1-30 of 151 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
F03_scaffold_13_1
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(264..824)
DNA (561bp) protein (187aa)
Rubredoxin/rubrerythrin {ECO:0000313|EMBL:CDA65509.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
F03_scaffold_13_2
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(888..1322)
DNA (435bp) protein (145aa)
Peroxide operon regulator {ECO:0000313|EMBL:CDA65508.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
F03_scaffold_13_3
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1474..2046)
DNA (573bp) protein (191aa)
Uncharacterized protein {ECO:0000313|EMBL:CDA65507.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
F03_scaffold_13_4
Prevotella copri, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2181..4853)
DNA (2673bp) protein (891aa)
FtsK/SpoIIIE family protein {ECO:0000313|EMBL:EFB36413.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella copri DSM 18205.;"
F03_scaffold_13_5
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4968..5588
DNA (621bp) protein (207aa)
3'-5' exonuclease domain protein {ECO:0000313|EMBL:CDA65505.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
F03_scaffold_13_6
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5633..6814
DNA (1182bp) protein (394aa)
Methyltransferase {ECO:0000313|EMBL:CDA65504.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
F03_scaffold_13_7
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6840..7766
DNA (927bp) protein (309aa)
Uncharacterized protein {ECO:0000313|EMBL:CDA65503.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
F03_scaffold_13_8
Prevotella copri, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7780..10347
DNA (2568bp) protein (856aa)
Uncharacterized protein {ECO:0000313|EMBL:EFB36409.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella copri DSM 18205.;"
F03_scaffold_13_9
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10337..11857
DNA (1521bp) protein (507aa)
Replicative DNA helicase {ECO:0000313|EMBL:CDA65501.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
F03_scaffold_13_10
Prevotella sp. CAG:732, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12268..13770
DNA (1503bp) protein (501aa)
2-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_01025, ECO:0000256|SAAS:SAAS00049060}; EC=2.3.3.13 {ECO:0000256|HAMAP-Rule:MF_01025, ECO:0000256|SAAS:SAAS00085331};; Alpha-IPM synthase {ECO:0000256|HAMAP-Rule:MF_01025}; Alpha-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_01025}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:732.;"
F03_scaffold_13_11
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13841..15235
DNA (1395bp) protein (465aa)
3-isopropylmalate dehydratase large subunit {ECO:0000256|HAMAP-Rule:MF_01026, ECO:0000256|SAAS:SAAS00091369}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01026, ECO:0000256|SAAS:SAAS00091399};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01026}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01026}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
F03_scaffold_13_12
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15325..15915
DNA (591bp) protein (197aa)
3-isopropylmalate dehydratase {ECO:0000256|SAAS:SAAS00089872}; EC=4.2.1.33 {ECO:0000256|SAAS:SAAS00089872};; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
F03_scaffold_13_13
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15966..17561
DNA (1596bp) protein (532aa)
(R)-citramalate synthase {ECO:0000313|EMBL:CDA65497.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
F03_scaffold_13_14
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17653..18714
DNA (1062bp) protein (354aa)
3-isopropylmalate dehydrogenase {ECO:0000256|RuleBase:RU004445, ECO:0000256|SAAS:SAAS00089855}; EC=1.1.1.85 {ECO:0000256|RuleBase:RU004445, ECO:0000256|SAAS:SAAS00089855};; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
F03_scaffold_13_15
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18822..19505
DNA (684bp) protein (228aa)
Putative TPR repeat domain exported protein {ECO:0000313|EMBL:CDA65495.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
F03_scaffold_13_16
Prevotella copri, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19781..20932)
DNA (1152bp) protein (384aa)
DegT/DnrJ/EryC1/StrS aminotransferase family protein {ECO:0000313|EMBL:EFB36398.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella copri DSM 18205.;"
F03_scaffold_13_trna_5
unknown

Not on your lists

comp(21316..21386)
DNA (71bp)
transferRNA Cys
F03_scaffold_13_17
Prevotella oris, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21446..21625)
DNA (180bp) protein (60aa)
Uncharacterized protein {ECO:0000313|EMBL:EFB30922.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella oris F0302.;"
F03_scaffold_13_18
Prevotella sp. CAG:604, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21625..21846)
DNA (222bp) protein (74aa)
Uncharacterized protein {ECO:0000313|EMBL:CDA56515.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:604.;"
F03_scaffold_13_19
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21914..22831)
DNA (918bp) protein (306aa)
Uncharacterized protein {ECO:0000313|EMBL:CDA66588.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
F03_scaffold_13_20
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22857..24131
DNA (1275bp) protein (425aa)
Replication-associated recombination protein A {ECO:0000313|EMBL:CDA66587.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
F03_scaffold_13_21
Prevotella sp. CAG:604, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24134..24781
DNA (648bp) protein (216aa)
YadS protein {ECO:0000313|EMBL:CDA58224.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:604.;"
F03_scaffold_13_22
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24832..26340
DNA (1509bp) protein (503aa)
YngK protein {ECO:0000313|EMBL:CDA66585.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
F03_scaffold_13_23
unknown

Not on your lists

26422..26541
DNA (120bp) protein (40aa)

This feature has no annotations

F03_scaffold_13_24
Prevotella sp. CAG:279, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26909..27511
DNA (603bp) protein (201aa)
Uncharacterized protein {ECO:0000313|EMBL:CDE40331.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:279.;"
F03_scaffold_13_25
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27524..28321
DNA (798bp) protein (266aa)
Polysaccharide biosynthesis/export family protein {ECO:0000313|EMBL:EXY41428.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3774 T13.;"
F03_scaffold_13_26
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28456..30930
DNA (2475bp) protein (825aa)
Capsular exopolysaccharide family domain protein {ECO:0000313|EMBL:EXZ75604.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3976T8.;"
F03_scaffold_13_27
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30975..31691
DNA (717bp) protein (239aa)
Putative capsular polysaccharide biosythesis protein {ECO:0000313|EMBL:ABR44944.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC; 11152).;"
F03_scaffold_13_28
Prevotella sp. CAG:732, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31838..31930)
DNA (93bp) protein (31aa)
Uncharacterized protein {ECO:0000313|EMBL:CDD17470.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:732.;"
F03_scaffold_13_29
Prevotella sp. CAG:732, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31899..32462)
DNA (564bp) protein (188aa)
N-acetylmuramoyl-L-alanine amidase {ECO:0000313|EMBL:CDD21054.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:732.;"
Displaying items 1-30 of 151 in total

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