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F03_scaffold_40

Search features with annotation key words

Displaying items 1-30 of 70 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
F03_scaffold_40_1
unknown

Not on your lists

1..174
DNA (174bp) protein (58aa)

This feature has no annotations

F03_scaffold_40_2
Prevotella sp. CAG:1092, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(719..1915)
DNA (1197bp) protein (399aa)
Uncharacterized protein {ECO:0000313|EMBL:CCZ11926.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:1092.;"
F03_scaffold_40_3
Prevotella multisaccharivorax, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2282..2893
DNA (612bp) protein (204aa)
Resolvase domain-containing protein {ECO:0000313|EMBL:EGN57899.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella multisaccharivorax DSM 17128.;"
F03_scaffold_40_4
Prevotella sp. CAG:732, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3030..4070)
DNA (1041bp) protein (347aa)
NADP-dependent oxidoreductase domain protein {ECO:0000313|EMBL:CDD18938.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:732.;"
F03_scaffold_40_5
unknown

Not on your lists

comp(4067..4297)
DNA (231bp) protein (77aa)

This feature has no annotations

F03_scaffold_40_6
Bacteroides clarus CAG:160, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4391..5266)
DNA (876bp) protein (292aa)
Uncharacterized protein {ECO:0000313|EMBL:CDB81852.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides clarus CAG:160.;"
F03_scaffold_40_7
unknown

Not on your lists

5424..5651
DNA (228bp) protein (76aa)

This feature has no annotations

F03_scaffold_40_trna_3
unknown

Not on your lists

comp(5645..5726)
DNA (82bp)
transferRNA Tyr
F03_scaffold_40_8
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5825..7222)
DNA (1398bp) protein (466aa)
Bacterial extracellular solute-binding protein {ECO:0000313|EMBL:CDA65231.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
F03_scaffold_40_9

Not on your lists

comp(7224..8018)
DNA (795bp) protein (265aa)
Binding-protein-dependent transport system inner membrane component {ECO:0000313|EMBL:EKC61439.1}; species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
F03_scaffold_40_10
unknown

Not on your lists

8042..8914
DNA (873bp) protein (291aa)

This feature has no annotations

F03_scaffold_40_11
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8888..10288)
DNA (1401bp) protein (467aa)
Polyamine-transporting ATPase {ECO:0000256|SAAS:SAAS00035095}; EC=3.6.3.31 {ECO:0000256|SAAS:SAAS00035095};; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
F03_scaffold_40_12
Prevotella stercorea, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13665..14027)
DNA (363bp) protein (121aa)
CRISPR-associated endoribonuclease Cas2 {ECO:0000256|HAMAP-Rule:MF_01471}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01471};; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella stercorea DSM 18206.;"
F03_scaffold_40_13
Prevotella stercorea, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14024..14908)
DNA (885bp) protein (295aa)
CRISPR-associated endonuclease Cas1 {ECO:0000256|HAMAP-Rule:MF_01470}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01470};; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella stercorea DSM 18206.;"
F03_scaffold_40_14
Prevotella stercorea, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14910..18533)
DNA (3624bp) protein (1208aa)
CRISPR-associated endonuclease Cas9 {ECO:0000256|HAMAP-Rule:MF_01480}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01480};; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella stercorea DSM 18206.;"
F03_scaffold_40_15
Prevotella sp. CAG:732, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18925..19593
DNA (669bp) protein (223aa)
Uncharacterized protein {ECO:0000313|EMBL:CDD20473.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:732.;"
F03_scaffold_40_16
Prevotella copri, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19632..20555)
DNA (924bp) protein (308aa)
Antioxidant, AhpC/TSA family {ECO:0000313|EMBL:EFB35960.1}; EC=1.11.1.15 {ECO:0000313|EMBL:EFB35960.1};; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella copri DSM 18205.;"
F03_scaffold_40_17
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20606..22744)
DNA (2139bp) protein (713aa)
Peptidyl-dipeptidase Dcp {ECO:0000313|EMBL:CDA65223.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
F03_scaffold_40_18
Prevotella sp. CAG:520, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22857..23360
DNA (504bp) protein (168aa)
Thioredoxin family protein {ECO:0000313|EMBL:CDB04636.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:520.;"
F03_scaffold_40_19
unknown

Not on your lists

23989..24156
DNA (168bp) protein (56aa)

This feature has no annotations

F03_scaffold_40_20
Parabacteroides sp. HGS0025, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24153..25520
DNA (1368bp) protein (456aa)
Uncharacterized protein {ECO:0000313|EMBL:KKB45511.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. HGS0025.;"
F03_scaffold_40_21
Parabacteroides sp. HGS0025, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25517..27793
DNA (2277bp) protein (759aa)
Uncharacterized protein {ECO:0000313|EMBL:KKB46086.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. HGS0025.;"
F03_scaffold_40_22
Parabacteroides sp. HGS0025, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27805..28335
DNA (531bp) protein (177aa)
Uncharacterized protein {ECO:0000313|EMBL:KKB45513.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. HGS0025.;"
F03_scaffold_40_23
Parabacteroides sp. HGS0025, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28332..31739
DNA (3408bp) protein (1136aa)
Uncharacterized protein {ECO:0000313|EMBL:KKB45514.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. HGS0025.;"
F03_scaffold_40_24
unknown

Not on your lists

31763..32761
DNA (999bp) protein (333aa)

This feature has no annotations

F03_scaffold_40_25
Prevotella copri, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

32880..33383
DNA (504bp) protein (168aa)
Uncharacterized protein {ECO:0000313|EMBL:EFB35989.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella copri DSM 18205.;"
F03_scaffold_40_26
Prevotella sp. CAG:604, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(33620..35197)
DNA (1578bp) protein (526aa)
Uncharacterized protein {ECO:0000313|EMBL:CDA53427.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:604.;"
F03_scaffold_40_27
Prevotella copri, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

35503..35829
DNA (327bp) protein (109aa)
Uncharacterized protein {ECO:0000313|EMBL:EFB35990.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella copri DSM 18205.;"
F03_scaffold_40_28
Prevotella copri, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

35851..36018
DNA (168bp) protein (56aa)
Uncharacterized protein {ECO:0000313|EMBL:EFB35993.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella copri DSM 18205.;"
F03_scaffold_40_29
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

36092..36739
DNA (648bp) protein (216aa)
Putative leucine rich repeat domain protein {ECO:0000313|EMBL:CDA67243.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
Displaying items 1-30 of 70 in total

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