ggKbase home page

F03_scaffold_168

Search features with annotation key words

Displaying items 1-30 of 66 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
F03_scaffold_168_1
unknown

Not on your lists

1..258
DNA (258bp) protein (86aa)

This feature has no annotations

F03_scaffold_168_2
Chlamydia trachomatis, Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

349..927
DNA (579bp) protein (193aa)
Putative DNA-binding protein {ECO:0000313|EMBL:CRH74522.1}; species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia trachomatis.;"
F03_scaffold_168_3
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1052..1201)
DNA (150bp) protein (50aa)
Uncharacterized protein {ECO:0000313|EMBL:CDA65197.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
F03_scaffold_168_4
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1213..2199)
DNA (987bp) protein (329aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
F03_scaffold_168_5
Prevotella sp. CAG:732, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2328..3947
DNA (1620bp) protein (540aa)
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CDD19477.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:732.;"
F03_scaffold_168_6
Prevotella sp. CAG:604, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4071..4715
DNA (645bp) protein (215aa)
Protein GrpE {ECO:0000256|HAMAP-Rule:MF_01151, ECO:0000256|RuleBase:RU000639}; HSP-70 cofactor {ECO:0000256|HAMAP-Rule:MF_01151}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:604.;"
F03_scaffold_168_7
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4737..5894
DNA (1158bp) protein (386aa)
Chaperone protein DnaJ {ECO:0000256|HAMAP-Rule:MF_01152, ECO:0000256|SAAS:SAAS00053159}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
F03_scaffold_168_8
Prevotella copri, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5985..7226
DNA (1242bp) protein (414aa)
Bifunctional protein FolC {ECO:0000313|EMBL:EFB36357.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella copri DSM 18205.;"
F03_scaffold_168_9
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7336..8421
DNA (1086bp) protein (362aa)
Aldose 1-epimerase {ECO:0000256|PIRNR:PIRNR005096}; EC=5.1.3.3 {ECO:0000256|PIRNR:PIRNR005096};; Galactose mutarotase {ECO:0000256|PIRNR:PIRNR005096}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
F03_scaffold_168_10
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8529..9854
DNA (1326bp) protein (442aa)
Sugar transporter {ECO:0000313|EMBL:CDA66863.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
F03_scaffold_168_11
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9961..11121
DNA (1161bp) protein (387aa)
Galactokinase {ECO:0000256|SAAS:SAAS00025843}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
F03_scaffold_168_12
Prevotella copri, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11333..12520
DNA (1188bp) protein (396aa)
Aldose 1-epimerase {ECO:0000256|PIRNR:PIRNR005096}; EC=5.1.3.3 {ECO:0000256|PIRNR:PIRNR005096};; Galactose mutarotase {ECO:0000256|PIRNR:PIRNR005096}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella copri DSM 18205.;"
F03_scaffold_168_13
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12575..14299
DNA (1725bp) protein (575aa)
Na+/glucose cotransporter {ECO:0000313|EMBL:CDA66866.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
F03_scaffold_168_14
Prevotella sp. CAG:732, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14377..15057
DNA (681bp) protein (227aa)
Hydrolase NUDIX family {ECO:0000313|EMBL:CDD20308.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:732.;"
F03_scaffold_168_15
Prevotella sp. CAG:732, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15084..15785
DNA (702bp) protein (234aa)
L-ribulose-5-phosphate 4-epimerase {ECO:0000313|EMBL:CDD20309.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:732.;"
F03_scaffold_168_16
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15894..17435
DNA (1542bp) protein (514aa)
L-arabinose isomerase {ECO:0000256|HAMAP-Rule:MF_00519, ECO:0000256|SAAS:SAAS00008909}; EC=5.3.1.4 {ECO:0000256|HAMAP-Rule:MF_00519, ECO:0000256|SAAS:SAAS00008909};; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
F03_scaffold_168_17
Prevotella copri, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17591..19186
DNA (1596bp) protein (532aa)
Carbohydrate kinase, FGGY family protein {ECO:0000313|EMBL:EFB36366.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella copri DSM 18205.;"
F03_scaffold_168_18
Prevotella sp. CAG:732, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19359..20927
DNA (1569bp) protein (523aa)
Alpha-N-arabinofuranosidase 2 {ECO:0000313|EMBL:CDD19542.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:732.;"
F03_scaffold_168_19
Prevotella copri, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20973..22994
DNA (2022bp) protein (674aa)
Transketolase {ECO:0000256|RuleBase:RU004996}; EC=2.2.1.1 {ECO:0000256|RuleBase:RU004996};; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella copri DSM 18205.;"
F03_scaffold_168_20
Prevotella sp. CAG:386, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23073..23516
DNA (444bp) protein (148aa)
Ribose 5-phosphate isomerase B {ECO:0000313|EMBL:CDC25253.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:386.;"
F03_scaffold_168_21
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23710..24984)
DNA (1275bp) protein (425aa)
Na(+)-translocating NADH-quinone reductase subunit F {ECO:0000256|HAMAP-Rule:MF_00430}; Short=Na(+)-NQR subunit F {ECO:0000256|HAMAP-Rule:MF_00430};; Short=Na(+)-translocating NQR subunit F {ECO:0000256|HAMAP-Rule:MF_00430};; EC=1.6.5.8 {ECO:0000256|HAMAP-Rule:MF_00430};; NQR complex subunit F {ECO:0000256|HAMAP-Rule:MF_00430}; NQR-1 subunit F {ECO:0000256|HAMAP-Rule:MF_00430}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
F03_scaffold_168_22
Prevotella buccae, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25006..25632)
DNA (627bp) protein (209aa)
Na(+)-translocating NADH-quinone reductase subunit E {ECO:0000256|HAMAP-Rule:MF_00429, ECO:0000256|SAAS:SAAS00170325}; Short=Na(+)-NQR subunit E {ECO:0000256|HAMAP-Rule:MF_00429};; Short=Na(+)-translocating NQR subunit E {ECO:0000256|HAMAP-Rule:MF_00429};; EC=1.6.5.8 {ECO:0000256|HAMAP-Rule:MF_00429, ECO:0000256|SAAS:SAAS00179335};; NQR complex subunit E {ECO:0000256|HAMAP-Rule:MF_00429}; NQR-1 subunit E {ECO:0000256|HAMAP-Rule:MF_00429}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella buccae ATCC 33574.;"
F03_scaffold_168_23

Not on your lists

comp(25635..26261)
DNA (627bp) protein (209aa)
Na(+)-translocating NADH-quinone reductase subunit D {ECO:0000313|EMBL:EKC57714.1}; species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
F03_scaffold_168_24
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26296..26898)
DNA (603bp) protein (201aa)
Na(+)-translocating NADH-quinone reductase subunit C {ECO:0000256|HAMAP-Rule:MF_00427}; Short=Na(+)-NQR subunit C {ECO:0000256|HAMAP-Rule:MF_00427};; Short=Na(+)-translocating NQR subunit C {ECO:0000256|HAMAP-Rule:MF_00427};; EC=1.6.5.8 {ECO:0000256|HAMAP-Rule:MF_00427};; NQR complex subunit C {ECO:0000256|HAMAP-Rule:MF_00427}; NQR-1 subunit C {ECO:0000256|HAMAP-Rule:MF_00427}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
F03_scaffold_168_25
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26913..28073)
DNA (1161bp) protein (387aa)
Na(+)-translocating NADH-quinone reductase subunit B {ECO:0000256|HAMAP-Rule:MF_00426}; Short=Na(+)-NQR subunit B {ECO:0000256|HAMAP-Rule:MF_00426};; Short=Na(+)-translocating NQR subunit B {ECO:0000256|HAMAP-Rule:MF_00426};; EC=1.6.5.8 {ECO:0000256|HAMAP-Rule:MF_00426};; NQR complex subunit B {ECO:0000256|HAMAP-Rule:MF_00426}; NQR-1 subunit B {ECO:0000256|HAMAP-Rule:MF_00426}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
F03_scaffold_168_26
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28095..29450)
DNA (1356bp) protein (452aa)
Na(+)-translocating NADH-quinone reductase subunit A {ECO:0000256|HAMAP-Rule:MF_00425, ECO:0000256|SAAS:SAAS00017509}; Short=Na(+)-NQR subunit A {ECO:0000256|HAMAP-Rule:MF_00425};; Short=Na(+)-translocating NQR subunit A {ECO:0000256|HAMAP-Rule:MF_00425};; EC=1.6.5.8 {ECO:0000256|HAMAP-Rule:MF_00425, ECO:0000256|SAAS:SAAS00179150};; NQR complex subunit A {ECO:0000256|HAMAP-Rule:MF_00425}; NQR-1 subunit A {ECO:0000256|HAMAP-Rule:MF_00425}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
F03_scaffold_168_27
unknown

Not on your lists

comp(29467..29775)
DNA (309bp) protein (103aa)

This feature has no annotations

F03_scaffold_168_28
Prevotella oris, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29822..31012
DNA (1191bp) protein (397aa)
Site-specific recombinase, phage integrase family {ECO:0000313|EMBL:EFB31710.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella oris F0302.;"
F03_scaffold_168_29
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31138..32400)
DNA (1263bp) protein (421aa)
Uncharacterized protein {ECO:0000313|EMBL:EDO55787.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis ATCC 8492.;"
F03_scaffold_168_30
Bacteroides sp. 1_1_6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(32711..33058)
DNA (348bp) protein (116aa)
Uncharacterized protein {ECO:0000313|EMBL:EES70153.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_6.;"
Displaying items 1-30 of 66 in total

View Taxonomy