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F03_scaffold_238

Search features with annotation key words

Displaying items 1-30 of 38 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
F03_scaffold_238_1
Prevotella sp. CAG:386, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(381..473)
DNA (93bp) protein (31aa)
Putative lipoprotein {ECO:0000313|EMBL:CDC26297.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:386.;"
F03_scaffold_238_2
Prevotella copri, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1043..1585)
DNA (543bp) protein (181aa)
Putative DNA-binding protein {ECO:0000313|EMBL:EFB35722.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella copri DSM 18205.;"
F03_scaffold_238_3
Prevotella copri, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2149..4023
DNA (1875bp) protein (625aa)
DNA (Cytosine-5-)-methyltransferase {ECO:0000313|EMBL:EFB35857.1}; EC=2.1.1.37 {ECO:0000313|EMBL:EFB35857.1};; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella copri DSM 18205.;"
F03_scaffold_238_4
Prevotella copri, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4035..5252
DNA (1218bp) protein (406aa)
Uncharacterized protein {ECO:0000313|EMBL:EFB35858.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella copri DSM 18205.;"
F03_scaffold_238_5
unknown

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comp(5336..5479)
DNA (144bp) protein (48aa)

This feature has no annotations

F03_scaffold_238_6
unknown

Not on your lists

5496..6236
DNA (741bp) protein (247aa)

This feature has no annotations

F03_scaffold_238_7
unknown

Not on your lists

6264..7154
DNA (891bp) protein (297aa)

This feature has no annotations

F03_scaffold_238_8
Prevotella ruminicola, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7157..7576
DNA (420bp) protein (140aa)
Uncharacterized protein {ECO:0000313|EMBL:ADE81867.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella ruminicola (strain ATCC 19189 / JCM 8958 / 23).;"
F03_scaffold_238_9
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7747..8034
DNA (288bp) protein (96aa)
Uncharacterized protein {ECO:0000313|EMBL:CDA66568.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
F03_scaffold_238_10
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8282..8590
DNA (309bp) protein (103aa)
Cell division topological specificity factor {ECO:0000313|EMBL:CDA66567.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
F03_scaffold_238_11
Prevotella sp. CAG:386, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8587..10974
DNA (2388bp) protein (796aa)
VirE protein {ECO:0000313|EMBL:CDC26562.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:386.;"
F03_scaffold_238_12
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10989..11552
DNA (564bp) protein (188aa)
Uncharacterized protein {ECO:0000313|EMBL:CDA66477.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
F03_scaffold_238_13
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11807..12781)
DNA (975bp) protein (325aa)
Uncharacterized protein {ECO:0000313|EMBL:CDA66612.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
F03_scaffold_238_14
Prevotella sp. CAG:604, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12812..14002)
DNA (1191bp) protein (397aa)
Uncharacterized protein {ECO:0000313|EMBL:CDA53572.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:604.;"
F03_scaffold_238_15
Prevotella sp. CAG:732, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(14142..16823)
DNA (2682bp) protein (894aa)
Valine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00026840}; EC=6.1.1.9 {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00105779};; Valyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02004}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:732.;"
F03_scaffold_238_16
Prevotella sp. CAG:732, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16956..17189
DNA (234bp) protein (78aa)
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:CDD17005.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:732.;"
F03_scaffold_238_17
unknown

Not on your lists

17197..17301
DNA (105bp) protein (35aa)

This feature has no annotations

F03_scaffold_238_18
Prevotella copri, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17317..18231
DNA (915bp) protein (305aa)
MazG family protein {ECO:0000313|EMBL:EFB34575.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella copri DSM 18205.;"
F03_scaffold_238_19
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18568..19128
DNA (561bp) protein (187aa)
Putative lipoprotein {ECO:0000313|EMBL:CDA66608.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
F03_scaffold_238_20
Prevotella copri, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19145..20059
DNA (915bp) protein (305aa)
Ribonuclease Z {ECO:0000256|HAMAP-Rule:MF_01818}; Short=RNase Z {ECO:0000256|HAMAP-Rule:MF_01818};; EC=3.1.26.11 {ECO:0000256|HAMAP-Rule:MF_01818};; tRNA 3 endonuclease {ECO:0000256|HAMAP-Rule:MF_01818}; tRNase Z {ECO:0000256|HAMAP-Rule:MF_01818}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella copri DSM 18205.;"
F03_scaffold_238_21
Prevotella copri, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20147..20707
DNA (561bp) protein (187aa)
Sigma-70 region 2 {ECO:0000313|EMBL:EFB34572.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella copri DSM 18205.;"
F03_scaffold_238_22
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20700..22142
DNA (1443bp) protein (481aa)
Uncharacterized protein {ECO:0000313|EMBL:CDA66605.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
F03_scaffold_238_23
Prevotella copri, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22279..24624)
DNA (2346bp) protein (782aa)
Glutamate synthase (NADPH), homotetrameric {ECO:0000313|EMBL:EFB34570.1}; EC=1.4.1.13 {ECO:0000313|EMBL:EFB34570.1};; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella copri DSM 18205.;"
F03_scaffold_238_24
Prevotella sp. CAG:386, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24820..26112)
DNA (1293bp) protein (431aa)
Serine--tRNA ligase {ECO:0000313|EMBL:CDC24355.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:386.;"
F03_scaffold_238_25

Not on your lists


comp(26319..26609)
DNA (291bp) protein (97aa)
50S ribosomal protein L27 {ECO:0000313|EMBL:EKC65420.1}; species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
F03_scaffold_238_26
Prevotella sp. CAG:604, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(26629..26946)
DNA (318bp) protein (106aa)
50S ribosomal protein L21 {ECO:0000256|HAMAP-Rule:MF_01363, ECO:0000256|RuleBase:RU000562}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:604.;"
F03_scaffold_238_27
Prevotella disiens, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27153..27329
DNA (177bp) protein (59aa)
Uncharacterized protein {ECO:0000313|EMBL:ERJ72927.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella disiens JCM 6334 = ATCC 29426.;"
F03_scaffold_238_28
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27464..29752)
DNA (2289bp) protein (763aa)
NADP-dependent malic enzyme {ECO:0000313|EMBL:CDA66600.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
F03_scaffold_238_29
Prevotella copri, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29864..30529
DNA (666bp) protein (222aa)
Transcriptional regulator, TetR family {ECO:0000313|EMBL:EFB34564.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella copri DSM 18205.;"
F03_scaffold_238_30
Prevotella copri, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30532..31506)
DNA (975bp) protein (325aa)
Uncharacterized protein {ECO:0000313|EMBL:EFB34563.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella copri DSM 18205.;"
Displaying items 1-30 of 38 in total

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