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F03_scaffold_253

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Displaying 29 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
F03_scaffold_253_1
Prevotella stercorea, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(1..624)
DNA (624bp) protein (208aa)
Uncharacterized protein {ECO:0000313|EMBL:EHJ41934.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella stercorea DSM 18206.;"
F03_scaffold_253_2
Prevotella stercorea, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(618..1589)
DNA (972bp) protein (324aa)
Uncharacterized protein {ECO:0000313|EMBL:EHJ41933.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella stercorea DSM 18206.;"
F03_scaffold_253_3
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(2106..3413)
DNA (1308bp) protein (436aa)
Enolase {ECO:0000256|HAMAP-Rule:MF_00318}; EC=4.2.1.11 {ECO:0000256|HAMAP-Rule:MF_00318};; 2-phospho-D-glycerate hydro-lyase {ECO:0000256|HAMAP-Rule:MF_00318}; 2-phosphoglycerate dehydratase {ECO:0000256|HAMAP-Rule:MF_00318}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
F03_scaffold_253_4
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(3678..4544)
DNA (867bp) protein (289aa)
Putative xylanase {ECO:0000313|EMBL:CDA65140.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
F03_scaffold_253_5
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(4558..5781)
DNA (1224bp) protein (408aa)
Uncharacterized protein {ECO:0000313|EMBL:CDA65141.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
F03_scaffold_253_6
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5819..6802)
DNA (984bp) protein (328aa)
Oxidoreductase Gfo/Idh/MocA family {ECO:0000313|EMBL:CDA65142.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
F03_scaffold_253_7
Prevotella copri, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6821..7429)
DNA (609bp) protein (203aa)
Probable GTP-binding protein EngB {ECO:0000256|HAMAP-Rule:MF_00321}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella copri DSM 18205.;"
F03_scaffold_253_8
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7503..9332)
DNA (1830bp) protein (610aa)
ABC transporter domain protein {ECO:0000313|EMBL:CDA65805.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
F03_scaffold_253_9
Prevotella copri, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9479..11695
DNA (2217bp) protein (739aa)
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella copri DSM 18205.;"
F03_scaffold_253_10
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11822..12259)
DNA (438bp) protein (146aa)
Uncharacterized protein {ECO:0000313|EMBL:CDA66549.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
F03_scaffold_253_11
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12308..12715)
DNA (408bp) protein (136aa)
Uncharacterized protein {ECO:0000313|EMBL:CDA66550.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
F03_scaffold_253_12
Prevotella copri, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12770..13312)
DNA (543bp) protein (181aa)
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella copri DSM 18205.;"
F03_scaffold_253_13
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13331..14854)
DNA (1524bp) protein (508aa)
Putative cell wall degradation protein {ECO:0000313|EMBL:CDA66552.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
F03_scaffold_253_14
Prevotella copri, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14880..15917)
DNA (1038bp) protein (346aa)
UDP-glucose 4-epimerase {ECO:0000313|EMBL:EFB34162.1}; EC=5.1.3.2 {ECO:0000313|EMBL:EFB34162.1};; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella copri DSM 18205.;"
F03_scaffold_253_15
Prevotella sp. CAG:592, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16094..17146
DNA (1053bp) protein (351aa)
Cation efflux system protein {ECO:0000313|EMBL:CDD06332.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:592.;"
F03_scaffold_253_16
Prevotella sp. CAG:604, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17182..20418
DNA (3237bp) protein (1079aa)
Uncharacterized protein {ECO:0000313|EMBL:CDA53461.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:604.;"
F03_scaffold_253_17
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20440..22434
DNA (1995bp) protein (665aa)
Fructose-1,6-bisphosphatase class 3 {ECO:0000256|HAMAP-Rule:MF_01854}; Short=FBPase class 3 {ECO:0000256|HAMAP-Rule:MF_01854};; EC=3.1.3.11 {ECO:0000256|HAMAP-Rule:MF_01854};; D-fructose-1,6-bisphosphate 1-phosphohydrolase class 3 {ECO:0000256|HAMAP-Rule:MF_01854}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
F03_scaffold_253_18
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22527..23735)
DNA (1209bp) protein (403aa)
Putative TPR domain protein {ECO:0000313|EMBL:CDA66874.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
F03_scaffold_253_19
Prevotella copri, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(23818..26427)
DNA (2610bp) protein (870aa)
DNA gyrase subunit A {ECO:0000256|HAMAP-Rule:MF_01897}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01897};; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella copri DSM 18205.;"
F03_scaffold_253_20
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26691..29282
DNA (2592bp) protein (864aa)
Negative regulator of genetic competence {ECO:0000313|EMBL:CDA66878.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
F03_scaffold_253_trna_1
unknown

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29452..29524
DNA (73bp)
transferRNA Thr
F03_scaffold_253_21
Prevotella sp. CAG:474, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29458..29742
DNA (285bp) protein (95aa)
Uncharacterized protein {ECO:0000313|EMBL:CDC98212.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:474.;"
F03_scaffold_253_trna_2
unknown

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29531..29601
DNA (71bp)
transferRNA Gly
F03_scaffold_253_22
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29688..30170)
DNA (483bp) protein (161aa)
Uncharacterized protein {ECO:0000313|EMBL:CDA66556.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
F03_scaffold_253_23
Prevotella sp. CAG:732, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30181..31764)
DNA (1584bp) protein (528aa)
Putative lipoprotein {ECO:0000313|EMBL:CDD19929.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:732.;"
F03_scaffold_253_24
Prevotella copri, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

32091..32723
DNA (633bp) protein (211aa)
Uncharacterized protein {ECO:0000313|EMBL:EFB35867.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella copri DSM 18205.;"
F03_scaffold_253_25
Bacteroides sp. CAG:1076, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

32736..34286
DNA (1551bp) protein (517aa)
Type I restriction-modification system M subunit {ECO:0000313|EMBL:CCY91694.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:1076.;"
F03_scaffold_253_26
Brachyspira pilosicoli, Brachyspira, Brachyspirales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

34283..35392
DNA (1110bp) protein (370aa)
Type I restriction modification DNA specificity domain-containing protein {ECO:0000313|EMBL:AFR71883.1}; species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira.;" source="Brachyspira pilosicoli B2904.;"
F03_scaffold_253_27
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

35426..36553
DNA (1128bp) protein (376aa)
Tax=AR18
Displaying 29 items

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