ggKbase home page

F03_scaffold_722

Search features with annotation key words

Displaying 27 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
F03_scaffold_722_1
Prevotella timonensis, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(131..895)
DNA (765bp) protein (255aa)
Cytosine-specific methyltransferase {ECO:0000256|RuleBase:RU000417}; EC=2.1.1.37 {ECO:0000256|RuleBase:RU000417};; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella timonensis CRIS 5C-B1.;"
F03_scaffold_722_2
Prevotella timonensis, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(977..1231)
DNA (255bp) protein (85aa)
Cytosine-specific methyltransferase {ECO:0000256|RuleBase:RU000417}; EC=2.1.1.37 {ECO:0000256|RuleBase:RU000417};; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella timonensis CRIS 5C-B1.;"
F03_scaffold_722_3
Prevotella timonensis, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1228..3099)
DNA (1872bp) protein (624aa)
Uncharacterized protein {ECO:0000313|EMBL:EFA97349.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella timonensis CRIS 5C-B1.;"
F03_scaffold_722_4
Prevotella copri, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3759..4046
DNA (288bp) protein (96aa)
Nucleotidyltransferase domain protein {ECO:0000313|EMBL:EFB33906.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella copri DSM 18205.;"
F03_scaffold_722_5
GWA2_Bacteroidetes_31_9_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4066..4380
DNA (315bp) protein (105aa)
Tax=GWA2_Bacteroidetes_31_9_curated
F03_scaffold_722_6
Prevotella sp. CAG:732, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4423..5355)
DNA (933bp) protein (311aa)
Sodium/bile acid symporter family protein {ECO:0000313|EMBL:CDD20250.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:732.;"
F03_scaffold_722_7
Prevotella sp. CAG:732, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5456..6085)
DNA (630bp) protein (210aa)
Uncharacterized protein {ECO:0000313|EMBL:CDD18468.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:732.;"
F03_scaffold_722_8
Capnocytophaga sp. oral taxon 332, Capnocytophaga, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(6145..6933)
DNA (789bp) protein (263aa)
Uncharacterized protein {ECO:0000313|EMBL:EKY07693.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Capnocytophaga.;" source="Capnocytophaga sp. oral taxon 332 str. F0381.;"
F03_scaffold_722_9
Bacteroides sp. CAG:770, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6908..7207)
DNA (300bp) protein (100aa)
Uncharacterized protein {ECO:0000313|EMBL:CDC64915.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:770.;"
F03_scaffold_722_10
Prevotella copri, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7438..8331
DNA (894bp) protein (298aa)
TIGR02452 family protein {ECO:0000313|EMBL:EFB36970.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella copri DSM 18205.;"
F03_scaffold_722_11
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8366..8779
DNA (414bp) protein (138aa)
TonB-dependent receptor {ECO:0000313|EMBL:CDA65547.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
F03_scaffold_722_12
Prevotella sp. CAG:604, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8833..9054)
DNA (222bp) protein (74aa)
Rhs family protein {ECO:0000313|EMBL:CDA55403.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:604.;"
F03_scaffold_722_13
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9342..9740)
DNA (399bp) protein (133aa)
AmpG protein {ECO:0000313|EMBL:CDA65548.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
F03_scaffold_722_14
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9773..10669)
DNA (897bp) protein (299aa)
AmpG protein {ECO:0000313|EMBL:CDA65548.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
F03_scaffold_722_15
Prevotella sp. CAG:732, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10714..14652)
DNA (3939bp) protein (1313aa)
Putative glycosyltransferase {ECO:0000313|EMBL:CDD18244.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:732.;"
F03_scaffold_722_16
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14722..15801
DNA (1080bp) protein (360aa)
Probable dual-specificity RNA methyltransferase RlmN {ECO:0000256|HAMAP-Rule:MF_01849}; EC=2.1.1.192 {ECO:0000256|HAMAP-Rule:MF_01849};; 23S rRNA (adenine(2503)-C(2))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; 23S rRNA m2A2503 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; Ribosomal RNA large subunit methyltransferase N {ECO:0000256|HAMAP-Rule:MF_01849}; tRNA (adenine(37)-C(2))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; tRNA m2A37 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
F03_scaffold_722_17
unknown

Not on your lists

15816..16043
DNA (228bp) protein (76aa)

This feature has no annotations

F03_scaffold_722_18
unknown

Not on your lists

16047..16151
DNA (105bp) protein (35aa)

This feature has no annotations

F03_scaffold_722_19
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16163..17296
DNA (1134bp) protein (378aa)
Putative lipoprotein {ECO:0000313|EMBL:CDA65551.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
F03_scaffold_722_20
Prevotella sp. CAG:732, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17396..18544
DNA (1149bp) protein (383aa)
Pyridoxal phosphate biosynthetic protein PdxA {ECO:0000313|EMBL:CDD18236.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:732.;"
F03_scaffold_722_21
Prevotella sp. CAG:732, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18674..19951
DNA (1278bp) protein (426aa)
Sigma-54 interaction domain protein {ECO:0000313|EMBL:CDD18234.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:732.;"
F03_scaffold_722_22
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19948..20469
DNA (522bp) protein (174aa)
Uncharacterized protein {ECO:0000313|EMBL:CDA65554.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
F03_scaffold_722_23
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20557..21321
DNA (765bp) protein (255aa)
Uncharacterized protein {ECO:0000313|EMBL:CDA65555.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
F03_scaffold_722_24
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21457..21876
DNA (420bp) protein (140aa)
Preprotein translocase SecG subunit {ECO:0000313|EMBL:CDA65556.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
F03_scaffold_722_trna_1
unknown

Not on your lists

22097..22170
DNA (74bp)
transferRNA His
F03_scaffold_722_25
Prevotella ruminicola, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22312..22791)
DNA (480bp) protein (160aa)
Uncharacterized protein {ECO:0000313|EMBL:ADE82299.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella ruminicola (strain ATCC 19189 / JCM 8958 / 23).;"
F03_scaffold_722_26
Prevotella sp. CAG:1092, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22998..25769)
DNA (2772bp) protein (924aa)
Uncharacterized protein {ECO:0000313|EMBL:CCZ11164.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:1092.;"
Displaying 27 items

View Taxonomy