ggKbase home page

F04_scaffold_61

Search features with annotation key words

Displaying items 1-30 of 78 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
F04_scaffold_61_1
Prevotella sp. CAG:873, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

229..915
DNA (687bp) protein (229aa)
Uridylate kinase {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197273}; Short=UK {ECO:0000256|HAMAP-Rule:MF_01220};; EC=2.7.4.22 {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197270};; Uridine monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_01220}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:873.;"
F04_scaffold_61_2
Prevotella sp. CAG:873, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

964..1524
DNA (561bp) protein (187aa)
Ribosome-recycling factor {ECO:0000256|HAMAP-Rule:MF_00040}; Short=RRF {ECO:0000256|HAMAP-Rule:MF_00040};; Ribosome-releasing factor {ECO:0000256|HAMAP-Rule:MF_00040}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:873.;"
F04_scaffold_61_3
Prevotella sp. CAG:873, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1766..2788
DNA (1023bp) protein (341aa)
Acyltransferase 3 {ECO:0000313|EMBL:CDE58354.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:873.;"
F04_scaffold_61_4
Prevotella sp. CAG:873, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2776..4227)
DNA (1452bp) protein (484aa)
MATE efflux family protein {ECO:0000313|EMBL:CDE58353.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:873.;"
F04_scaffold_61_5
Prevotella sp. CAG:873, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4273..4995)
DNA (723bp) protein (241aa)
Inner membrane family protein {ECO:0000313|EMBL:CDE58352.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:873.;"
F04_scaffold_61_6
Prevotella sp. CAG:873, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(5136..6923)
DNA (1788bp) protein (596aa)
Arginine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00123}; EC=6.1.1.19 {ECO:0000256|HAMAP-Rule:MF_00123};; Arginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00123}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:873.;"
F04_scaffold_61_7
Prevotella sp. CAG:873, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7231..8853)
DNA (1623bp) protein (541aa)
Peptidase S41 {ECO:0000313|EMBL:CDE58349.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:873.;"
F04_scaffold_61_8
Prevotella sp. CAG:873, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9054..9677)
DNA (624bp) protein (208aa)
Ribonuclease HII {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SAAS00016879}; Short=RNase HII {ECO:0000256|HAMAP-Rule:MF_00052};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SAAS00016872};; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:873.;"
F04_scaffold_61_trna_3
unknown

Not on your lists

comp(9873..9946)
DNA (74bp)
transferRNA Asp
F04_scaffold_61_9
Prevotella sp. CAG:873, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10416..11495)
DNA (1080bp) protein (360aa)
NAD dependent epimerase/reductase-related protein {ECO:0000313|EMBL:CDE58346.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:873.;"
F04_scaffold_61_10
Prevotella sp. CAG:873, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11543..12712)
DNA (1170bp) protein (390aa)
Uncharacterized protein {ECO:0000313|EMBL:CDE58345.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:873.;"
F04_scaffold_61_11
Prevotella sp. CAG:873, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12829..14499)
DNA (1671bp) protein (557aa)
Uncharacterized protein {ECO:0000313|EMBL:CDE58344.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:873.;"
F04_scaffold_61_12
Prevotella sp. CAG:873, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14517..15281)
DNA (765bp) protein (255aa)
Uncharacterized protein {ECO:0000313|EMBL:CDE58343.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:873.;"
F04_scaffold_61_13
Prevotella sp. CAG:873, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15328..17151)
DNA (1824bp) protein (608aa)
Putative arylsulfatase {ECO:0000313|EMBL:CDE58342.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:873.;"
F04_scaffold_61_14
Prevotella sp. CAG:873, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17404..18498)
DNA (1095bp) protein (365aa)
Glycosyl transferase group 1 family {ECO:0000313|EMBL:CDE58341.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:873.;"
F04_scaffold_61_15
Prevotella sp. CAG:873, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18495..19430)
DNA (936bp) protein (312aa)
Uncharacterized protein {ECO:0000313|EMBL:CDE58340.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:873.;"
F04_scaffold_61_16
Prevotella sp. CAG:873, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19424..20239)
DNA (816bp) protein (272aa)
Glycosyl transferase family 2 {ECO:0000313|EMBL:CDE58339.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:873.;"
F04_scaffold_61_17
Prevotella sp. CAG:873, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20569..21039
DNA (471bp) protein (157aa)
Endoribonuclease YbeY {ECO:0000256|HAMAP-Rule:MF_00009}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00009};; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:873.;"
F04_scaffold_61_18
Prevotella sp. CAG:873, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21179..22996
DNA (1818bp) protein (606aa)
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG {ECO:0000256|HAMAP-Rule:MF_00129}; Glucose-inhibited division protein A {ECO:0000256|HAMAP-Rule:MF_00129}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:873.;"
F04_scaffold_61_19
Prevotella sp. CAG:873, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23410..23928
DNA (519bp) protein (173aa)
Adenine phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00004, ECO:0000256|SAAS:SAAS00084274}; Short=APRT {ECO:0000256|HAMAP-Rule:MF_00004};; EC=2.4.2.7 {ECO:0000256|HAMAP-Rule:MF_00004, ECO:0000256|SAAS:SAAS00084255};; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:873.;"
F04_scaffold_61_20
Prevotella sp. CAG:873, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24192..26060
DNA (1869bp) protein (623aa)
UvrABC system protein C {ECO:0000256|HAMAP-Rule:MF_00203, ECO:0000256|SAAS:SAAS00088139}; Short=Protein UvrC {ECO:0000256|HAMAP-Rule:MF_00203};; Excinuclease ABC subunit C {ECO:0000256|HAMAP-Rule:MF_00203}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:873.;"
F04_scaffold_61_21
unknown

Not on your lists

comp(26216..26317)
DNA (102bp) protein (34aa)

This feature has no annotations

F04_scaffold_61_22
Prevotella sp. CAG:873, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26343..26930
DNA (588bp) protein (196aa)
HAD hydrolase family IA {ECO:0000313|EMBL:CDE58334.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:873.;"
F04_scaffold_61_23
Prevotella sp. CAG:873, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27076..27999
DNA (924bp) protein (308aa)
Riboflavin biosynthesis protein {ECO:0000256|PIRNR:PIRNR004491}; EC=2.7.1.26 {ECO:0000256|PIRNR:PIRNR004491};; EC=2.7.7.2 {ECO:0000256|PIRNR:PIRNR004491};; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:873.;"
F04_scaffold_61_24
Prevotella sp. CAG:873, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28122..28796
DNA (675bp) protein (225aa)
tRNA (guanine-N(1)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464}; EC=2.1.1.228 {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464};; M1G-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605}; tRNA [GM37] methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:873.;"
F04_scaffold_61_25
Prevotella sp. CAG:873, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28849..29484
DNA (636bp) protein (212aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU003915, ECO:0000256|RuleBase:RU004231}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU003915};; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:873.;"
F04_scaffold_61_26
Prevotella sp. CAG:873, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29665..30258
DNA (594bp) protein (198aa)
dTDP-4-dehydrorhamnose 3 5-epimerase {ECO:0000313|EMBL:CDE58330.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:873.;"
F04_scaffold_61_27
Prevotella sp. CAG:873, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30255..31286
DNA (1032bp) protein (344aa)
dTDP-glucose 4,6-dehydratase {ECO:0000256|RuleBase:RU004473}; EC=4.2.1.46 {ECO:0000256|RuleBase:RU004473};; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:873.;"
F04_scaffold_61_28
Bacteroides sp. CAG:927, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

31521..33149
DNA (1629bp) protein (543aa)
Signal peptidase I {ECO:0000256|RuleBase:RU362042}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU362042};; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:927.;"
F04_scaffold_61_29
Prevotella sp. CAG:873, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

33222..33929
DNA (708bp) protein (236aa)
WbqC-like family protein {ECO:0000313|EMBL:CDE58326.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:873.;"
Displaying items 1-30 of 78 in total

View Taxonomy