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F04_scaffold_78

Search features with annotation key words

Displaying items 1-30 of 59 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
F04_scaffold_78_1
Prevotella sp. CAG:873, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2..1915
DNA (1914bp) protein (638aa)
Uncharacterized protein {ECO:0000313|EMBL:CDE57398.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:873.;"
F04_scaffold_78_2
unknown

Not on your lists

comp(1823..2083)
DNA (261bp) protein (87aa)

This feature has no annotations

F04_scaffold_78_3
Prevotella sp. CAG:1031, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2025..4571)
DNA (2547bp) protein (849aa)
Endonuclease MutS2 {ECO:0000256|SAAS:SAAS00084206}; EC=3.-.-.- {ECO:0000256|SAAS:SAAS00278007};; EC=3.1.-.- {ECO:0000256|SAAS:SAAS00084246};; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:1031.;"
F04_scaffold_78_4
Prevotella sp. CAG:873, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4708..8799)
DNA (4092bp) protein (1364aa)
Uncharacterized protein {ECO:0000313|EMBL:CDE56889.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:873.;"
F04_scaffold_78_5
unknown

Not on your lists

comp(8910..9056)
DNA (147bp) protein (49aa)

This feature has no annotations

F04_scaffold_78_6
Prevotella sp. CAG:873, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9132..9857)
DNA (726bp) protein (242aa)
Molybdopterin-guanine dinucleotide biosynthesis protein B {ECO:0000313|EMBL:CDE56888.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:873.;"
F04_scaffold_78_7
Prevotella sp. CAG:873, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9935..11107)
DNA (1173bp) protein (391aa)
Thiazole biosynthesis protein ThiH {ECO:0000313|EMBL:CDE56887.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:873.;"
F04_scaffold_78_8
Prevotella sp. CAG:873, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11204..12916)
DNA (1713bp) protein (571aa)
Phosphomethylpyrimidine synthase {ECO:0000256|HAMAP-Rule:MF_00089, ECO:0000256|SAAS:SAAS00007814}; EC=4.1.99.17 {ECO:0000256|HAMAP-Rule:MF_00089, ECO:0000256|SAAS:SAAS00007809};; Hydroxymethylpyrimidine phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00089}; Thiamine biosynthesis protein ThiC {ECO:0000256|HAMAP-Rule:MF_00089}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:873.;"
F04_scaffold_78_9
Bacteroides sp. CAG:20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12989..13768)
DNA (780bp) protein (260aa)
Thiazole synthase {ECO:0000256|HAMAP-Rule:MF_00443}; EC=2.8.1.10 {ECO:0000256|HAMAP-Rule:MF_00443};; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:20.;"
F04_scaffold_78_10
Prevotella sp. CAG:873, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13838..15052)
DNA (1215bp) protein (405aa)
Thiamine-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00097, ECO:0000256|RuleBase:RU003826}; Short=TP synthase {ECO:0000256|HAMAP-Rule:MF_00097};; Short=TPS {ECO:0000256|HAMAP-Rule:MF_00097};; EC=2.5.1.3 {ECO:0000256|HAMAP-Rule:MF_00097, ECO:0000256|RuleBase:RU003826};; Thiamine-phosphate pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00097, ECO:0000256|RuleBase:RU003826}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:873.;"
F04_scaffold_78_11
Prevotella sp. CAG:873, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15114..15326)
DNA (213bp) protein (71aa)
Thiamine biosynthesis protein ThiS {ECO:0000313|EMBL:CDE56882.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:873.;"
F04_scaffold_78_12
Prevotella sp. CAG:873, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15326..16393)
DNA (1068bp) protein (356aa)
Phosphomethylpyrimidine kinase {ECO:0000313|EMBL:CDE56881.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:873.;"
F04_scaffold_78_13
Prevotella sp. CAG:873, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16689..17666
DNA (978bp) protein (326aa)
Uncharacterized protein {ECO:0000313|EMBL:CDE56880.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:873.;"
F04_scaffold_78_14
Prevotella sp. CAG:873, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17780..18124
DNA (345bp) protein (115aa)
Uncharacterized protein {ECO:0000313|EMBL:CDE56879.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:873.;"
F04_scaffold_78_15
Prevotella sp. CAG:1031, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18121..18555
DNA (435bp) protein (145aa)
Uncharacterized protein {ECO:0000313|EMBL:CCX44946.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:1031.;"
F04_scaffold_78_16
Prevotella sp. CAG:873, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18515..19519)
DNA (1005bp) protein (335aa)
Antioxidant AhpC/TSA family {ECO:0000313|EMBL:CDE56878.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:873.;"
F04_scaffold_78_17
Prevotella sp. CAG:873, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19712..21376
DNA (1665bp) protein (555aa)
Uncharacterized protein {ECO:0000313|EMBL:CDE56877.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:873.;"
F04_scaffold_78_18
Prevotella sp. CAG:873, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21511..22875
DNA (1365bp) protein (455aa)
Transporter {ECO:0000256|RuleBase:RU003732}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:873.;"
F04_scaffold_78_19
Prevotella sp. CAG:873, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22995..23813
DNA (819bp) protein (273aa)
Uncharacterized protein {ECO:0000313|EMBL:CDE56875.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:873.;"
F04_scaffold_78_20
Prevotella sp. CAG:873, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24006..25523
DNA (1518bp) protein (506aa)
2,3-bisphosphoglycerate-independent phosphoglycerate mutase {ECO:0000256|HAMAP-Rule:MF_01038, ECO:0000256|SAAS:SAAS00058362}; Short=BPG-independent PGAM {ECO:0000256|HAMAP-Rule:MF_01038};; Short=Phosphoglyceromutase {ECO:0000256|HAMAP-Rule:MF_01038};; Short=iPGM {ECO:0000256|HAMAP-Rule:MF_01038};; EC=5.4.2.12 {ECO:0000256|HAMAP-Rule:MF_01038, ECO:0000256|SAAS:SAAS00058367};; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:873.;"
F04_scaffold_78_21
Prevotella sp. CAG:873, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25520..26059
DNA (540bp) protein (180aa)
Uncharacterized protein {ECO:0000313|EMBL:CDE56873.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:873.;"
F04_scaffold_78_22
Prevotella sp. CAG:873, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26161..27519
DNA (1359bp) protein (453aa)
Biotin biosynthesis protein BioC {ECO:0000313|EMBL:CDE56872.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:873.;"
F04_scaffold_78_23
Prevotella sp. CAG:873, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27598..28857)
DNA (1260bp) protein (420aa)
Putative zinc protease YmxG {ECO:0000313|EMBL:CDE56871.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:873.;"
F04_scaffold_78_24
Prevotella sp. CAG:873, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28981..30570)
DNA (1590bp) protein (530aa)
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin) {ECO:0000256|HAMAP-Rule:MF_00159}; EC=1.17.7.3 {ECO:0000256|HAMAP-Rule:MF_00159};; 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00159}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:873.;"
F04_scaffold_78_25
Prevotella sp. CAG:873, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30572..31081)
DNA (510bp) protein (170aa)
N5-carboxyaminoimidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338}; Short=N5-CAIR mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};; EC=5.4.99.18 {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};; 5-(carboxyamino)imidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:873.;"
F04_scaffold_78_26
Prevotella sp. CAG:873, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31123..31860)
DNA (738bp) protein (246aa)
Uncharacterized protein {ECO:0000313|EMBL:CDE56868.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:873.;"
F04_scaffold_78_27
Prevotella sp. CAG:873, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31953..33425)
DNA (1473bp) protein (491aa)
RNA polymerase sigma-54 factor {ECO:0000313|EMBL:CDE56867.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:873.;"
F04_scaffold_78_28
Prevotella sp. CAG:873, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(33619..34779)
DNA (1161bp) protein (387aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:873.;"
F04_scaffold_78_29
Prevotella sp. CAG:873, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(34783..35391)
DNA (609bp) protein (203aa)
Uncharacterized protein {ECO:0000313|EMBL:CDE56860.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:873.;"
F04_scaffold_78_30
Prevotella sp. CAG:873, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

35729..36373
DNA (645bp) protein (215aa)
ATP-dependent dethiobiotin synthetase BioD {ECO:0000256|HAMAP-Rule:MF_00336}; EC=6.3.3.3 {ECO:0000256|HAMAP-Rule:MF_00336};; DTB synthetase {ECO:0000256|HAMAP-Rule:MF_00336}; Dethiobiotin synthase {ECO:0000256|HAMAP-Rule:MF_00336}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:873.;"
Displaying items 1-30 of 59 in total

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