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F04_scaffold_134

Search features with annotation key words

Displaying items 1-30 of 43 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
F04_scaffold_134_1
Bacteroides sp. CAG:927, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(171..2240)
DNA (2070bp) protein (690aa)
Putative cystathionine beta-lyase PatB {ECO:0000313|EMBL:CCX48313.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:927.;"
F04_scaffold_134_2
Prevotella sp. CAG:873, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2564..4495
DNA (1932bp) protein (644aa)
DNA gyrase subunit B {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363};; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:873.;"
F04_scaffold_134_3
Prevotella sp. CAG:873, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4691..6931
DNA (2241bp) protein (747aa)
Ribonuclease R {ECO:0000256|HAMAP-Rule:MF_01895}; Short=RNase R {ECO:0000256|HAMAP-Rule:MF_01895};; EC=3.1.13.1 {ECO:0000256|HAMAP-Rule:MF_01895};; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:873.;"
F04_scaffold_134_4
Prevotella sp. CAG:873, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6938..7312
DNA (375bp) protein (125aa)
Dihydroneopterin aldolase {ECO:0000313|EMBL:CDE58228.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:873.;"
F04_scaffold_134_5
Prevotella sp. CAG:873, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7394..8590)
DNA (1197bp) protein (399aa)
Uncharacterized protein {ECO:0000313|EMBL:CDE58229.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:873.;"
F04_scaffold_134_6
Prevotella sp. CAG:873, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(8789..9052)
DNA (264bp) protein (88aa)
50S ribosomal protein L27 {ECO:0000256|HAMAP-Rule:MF_00539}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:873.;"
F04_scaffold_134_7
Prevotella sp. CAG:873, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(9077..9397)
DNA (321bp) protein (107aa)
50S ribosomal protein L21 {ECO:0000256|HAMAP-Rule:MF_01363, ECO:0000256|RuleBase:RU000562}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:873.;"
F04_scaffold_134_8
Prevotella sp. P5-119, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9636..10028)
DNA (393bp) protein (131aa)
Contig46, whole genome shotgun sequence {ECO:0000313|EMBL:KIP63215.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella sp. P5-119.;"
F04_scaffold_134_9
unknown

Not on your lists

comp(10081..10338)
DNA (258bp) protein (86aa)

This feature has no annotations

F04_scaffold_134_10
Prevotella sp. CAG:487, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10335..11378)
DNA (1044bp) protein (348aa)
Uncharacterized protein {ECO:0000313|EMBL:CCZ14150.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:487.;"
F04_scaffold_134_11
Alloprevotella rava, Alloprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11961..12980
DNA (1020bp) protein (340aa)
Uncharacterized protein {ECO:0000313|EMBL:EHG23462.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Alloprevotella.;" source="Alloprevotella rava F0323.;"
F04_scaffold_134_12
Bacteroides sp. 1_1_14, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12973..13524
DNA (552bp) protein (184aa)
Putative uncharacterized protein {ECO:0000313|EMBL:EFI05994.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_14.;"
F04_scaffold_134_13
Prevotella sp. CAG:873, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13652..14563)
DNA (912bp) protein (304aa)
Uncharacterized protein {ECO:0000313|EMBL:CDE58224.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:873.;"
F04_scaffold_134_14
Prevotella sp. CAG:873, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14785..17496)
DNA (2712bp) protein (904aa)
Pyruvate phosphate dikinase {ECO:0000313|EMBL:CDE57927.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:873.;"
F04_scaffold_134_15
unknown

Not on your lists

17826..17981
DNA (156bp) protein (52aa)

This feature has no annotations

F04_scaffold_134_16
Prevotella sp. CAG:873, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18303..19001
DNA (699bp) protein (233aa)
Uncharacterized protein {ECO:0000313|EMBL:CDE57925.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:873.;"
F04_scaffold_134_17
Prevotella sp. CAG:873, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19276..21924
DNA (2649bp) protein (883aa)
Uncharacterized protein {ECO:0000313|EMBL:CDE57265.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:873.;"
F04_scaffold_134_18
Prevotella sp. CAG:873, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21960..23234
DNA (1275bp) protein (425aa)
Uncharacterized protein {ECO:0000313|EMBL:CDE57264.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:873.;"
F04_scaffold_134_19
Prevotella sp. CAG:1031, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23259..25406
DNA (2148bp) protein (716aa)
Uncharacterized protein {ECO:0000313|EMBL:CCX45159.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:1031.;"
F04_scaffold_134_20
Bacteroides sp. CAG:530, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25561..26241)
DNA (681bp) protein (227aa)
Transcriptional regulator AraC family {ECO:0000313|EMBL:CDA77730.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:530.;"
F04_scaffold_134_21
unknown

Not on your lists

comp(26199..26453)
DNA (255bp) protein (85aa)

This feature has no annotations

F04_scaffold_134_22
Prevotella sp. CAG:873, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26558..27538)
DNA (981bp) protein (327aa)
AMP-dependent synthetase and ligase {ECO:0000313|EMBL:CDE57256.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:873.;"
F04_scaffold_134_23
Prevotella sp. CAG:873, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27670..28722)
DNA (1053bp) protein (351aa)
Mandelate racemase/muconate lactonizing protein {ECO:0000313|EMBL:CDE57255.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:873.;"
F04_scaffold_134_24
Prevotella sp. CAG:873, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28727..29548)
DNA (822bp) protein (274aa)
1,4-dihydroxy-2-naphthoyl-CoA synthase {ECO:0000256|HAMAP-Rule:MF_01934}; Short=DHNA-CoA synthase {ECO:0000256|HAMAP-Rule:MF_01934};; EC=4.1.3.36 {ECO:0000256|HAMAP-Rule:MF_01934};; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:873.;"
F04_scaffold_134_25
Bacteroides sp. CAG:927, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29581..31242)
DNA (1662bp) protein (554aa)
2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase {ECO:0000256|HAMAP-Rule:MF_01659, ECO:0000256|SAAS:SAAS00056887}; Short=SEPHCHC synthase {ECO:0000256|HAMAP-Rule:MF_01659};; EC=2.2.1.9 {ECO:0000256|HAMAP-Rule:MF_01659, ECO:0000256|SAAS:SAAS00056850};; Menaquinone biosynthesis protein MenD {ECO:0000256|HAMAP-Rule:MF_01659}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:927.;"
F04_scaffold_134_26
Prevotella sp. CAG:873, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

31473..33269
DNA (1797bp) protein (599aa)
GTP-binding protein TypA/BipA {ECO:0000313|EMBL:CDE57549.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:873.;"
F04_scaffold_134_27
Prevotella sp. CAG:873, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

33316..34158
DNA (843bp) protein (281aa)
Dihydropteroate synthase {ECO:0000313|EMBL:CDE57550.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:873.;"
F04_scaffold_134_28
Prevotella sp. CAG:873, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

34195..34971
DNA (777bp) protein (259aa)
Transmembrane protein {ECO:0000313|EMBL:CDE57551.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:873.;"
F04_scaffold_134_29
Prevotella sp. CAG:873, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(35158..35697)
DNA (540bp) protein (180aa)
HDIG domain protein {ECO:0000313|EMBL:CDE57552.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:873.;"
F04_scaffold_134_30
Prevotella sp. CAG:873, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(35760..36788)
DNA (1029bp) protein (343aa)
Branched-chain amino acid aminotransferase {ECO:0000313|EMBL:CDE57553.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:873.;"
Displaying items 1-30 of 43 in total

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