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F04_scaffold_324

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
F04_scaffold_324_1
Prevotella sp. CAG:873, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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245..1813
DNA (1569bp) protein (523aa)
Amino acid/peptide transporter {ECO:0000313|EMBL:CDE56810.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:873.;"
F04_scaffold_324_2
Prevotella sp. CAG:873, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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2073..4073
DNA (2001bp) protein (667aa)
Potassium uptake protein {ECO:0000313|EMBL:CDE56811.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:873.;"
F04_scaffold_324_3
Prevotella sp. CAG:873, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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4510..5238
DNA (729bp) protein (243aa)
Possible lipoate--protein ligase {ECO:0000313|EMBL:CDE56812.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:873.;"
F04_scaffold_324_4
Prevotella sp. CAG:873, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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5352..6467
DNA (1116bp) protein (372aa)
Aminomethyltransferase {ECO:0000256|HAMAP-Rule:MF_00259, ECO:0000256|RuleBase:RU003981}; EC=2.1.2.10 {ECO:0000256|HAMAP-Rule:MF_00259, ECO:0000256|RuleBase:RU003981};; Glycine cleavage system T protein {ECO:0000256|HAMAP-Rule:MF_00259}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:873.;"
F04_scaffold_324_5
Prevotella sp. CAG:873, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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6556..6936
DNA (381bp) protein (127aa)
Glycine cleavage system H protein {ECO:0000256|HAMAP-Rule:MF_00272}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:873.;"
F04_scaffold_324_6
Prevotella sp. CAG:873, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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7085..8398
DNA (1314bp) protein (438aa)
Probable glycine dehydrogenase (decarboxylating) subunit 1 {ECO:0000256|HAMAP-Rule:MF_00712, ECO:0000256|SAAS:SAAS00015358}; EC=1.4.4.2 {ECO:0000256|HAMAP-Rule:MF_00712, ECO:0000256|SAAS:SAAS00022796};; Glycine cleavage system P-protein subunit 1 {ECO:0000256|HAMAP-Rule:MF_00712}; Glycine decarboxylase subunit 1 {ECO:0000256|HAMAP-Rule:MF_00712}; Glycine dehydrogenase (aminomethyl-transferring) subunit 1 {ECO:0000256|HAMAP-Rule:MF_00712}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:873.;"
F04_scaffold_324_7
Prevotella sp. CAG:873, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8395..9876
DNA (1482bp) protein (494aa)
Probable glycine dehydrogenase (decarboxylating) subunit 2 {ECO:0000256|HAMAP-Rule:MF_00713}; EC=1.4.4.2 {ECO:0000256|HAMAP-Rule:MF_00713};; Glycine cleavage system P-protein subunit 2 {ECO:0000256|HAMAP-Rule:MF_00713}; Glycine decarboxylase subunit 2 {ECO:0000256|HAMAP-Rule:MF_00713}; Glycine dehydrogenase (aminomethyl-transferring) subunit 2 {ECO:0000256|HAMAP-Rule:MF_00713}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:873.;"
F04_scaffold_324_8
Prevotella sp. CAG:873, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9879..11225
DNA (1347bp) protein (449aa)
Dihydrolipoyl dehydrogenase {ECO:0000313|EMBL:CDE56817.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:873.;"
F04_scaffold_324_9
Prevotella sp. CAG:873, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11294..12091
DNA (798bp) protein (266aa)
Uncharacterized protein {ECO:0000313|EMBL:CDE56818.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:873.;"
F04_scaffold_324_trna_3
unknown

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comp(12272..12355)
DNA (84bp)
transferRNA Leu
F04_scaffold_324_trna_2
unknown

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comp(12395..12467)
DNA (73bp)
transferRNA Gly
F04_scaffold_324_trna_1
unknown

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comp(12524..12596)
DNA (73bp)
transferRNA Gly
F04_scaffold_324_10
Prevotella sp. CAG:873, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12868..13509)
DNA (642bp) protein (214aa)
Metal-dependent phosphohydrolase HD sub domain {ECO:0000313|EMBL:CDE56819.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:873.;"
F04_scaffold_324_11
Prevotella sp. CAG:873, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13543..14985)
DNA (1443bp) protein (481aa)
Cardiolipin synthase {ECO:0000256|HAMAP-Rule:MF_01916}; Short=CL synthase {ECO:0000256|HAMAP-Rule:MF_01916};; EC=2.7.8.- {ECO:0000256|HAMAP-Rule:MF_01916};; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:873.;"
F04_scaffold_324_12
unknown

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comp(15648..15827)
DNA (180bp) protein (60aa)

This feature has no annotations

F04_scaffold_324_13
Prevotella sp. CAG:873, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16078..17583)
DNA (1506bp) protein (502aa)
Glutamate--ammonia ligase catalytic domain protein {ECO:0000313|EMBL:CDE56826.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:873.;"
F04_scaffold_324_14
Prevotella sp. CAG:873, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17932..20217
DNA (2286bp) protein (762aa)
Subtilase family domain protein {ECO:0000313|EMBL:CDE56827.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:873.;"
F04_scaffold_324_15
Prevotella sp. CAG:1031, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20334..22502
DNA (2169bp) protein (723aa)
Subtilase family domain protein {ECO:0000313|EMBL:CCX43262.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:1031.;"
F04_scaffold_324_16
Prevotella stercorea, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22882..26550
DNA (3669bp) protein (1223aa)
CRISPR-associated endonuclease Cas9 {ECO:0000256|HAMAP-Rule:MF_01480}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01480};; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella stercorea DSM 18206.;"
F04_scaffold_324_17
Prevotella stercorea, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26543..27427
DNA (885bp) protein (295aa)
CRISPR-associated endonuclease Cas1 {ECO:0000256|HAMAP-Rule:MF_01470}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01470};; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella stercorea DSM 18206.;"
F04_scaffold_324_18
Prevotella stercorea, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27424..27786
DNA (363bp) protein (121aa)
CRISPR-associated endoribonuclease Cas2 {ECO:0000256|HAMAP-Rule:MF_01471}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01471};; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella stercorea DSM 18206.;"
F04_scaffold_324_19

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comp(27899..28981)
DNA (1083bp) protein (361aa)
Site-specific recombinase, phage integrase family {ECO:0000313|EMBL:EJW92064.1}; species="unclassified sequences; metagenomes; organismal metagenomes.;" source="gut metagenome.;"
Displaying 22 items

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