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FFSP_062018_mid_0_1um_Hydrogenophilales_62_23

FFSP_062018_mid_0_1um_RIFOXYD1_FULL_Hydrogenophilales_62_11_curated_62_23
In projects: FFSP_062018_mid_0_1um  |  SOB_across_mines

Consensus taxonomy: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated  →  Hydrogenophilales  →  Betaproteobacteria  →  Proteobacteria  →  Bacteria

Description

(J)

Displaying items 701-750 of 800 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
FFSP_062018_mid_0_1um_scaffold_4062
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (66.67%)
3 3001 bp 61.11 25.79 99.97
FFSP_062018_mid_0_1um_scaffold_4107
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (75%)
4 2966 bp 58.90 25.79 95.08
FFSP_062018_mid_0_1um_scaffold_1210
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (92.31%)
13 8099 bp 62.02 25.80 96.20
FFSP_062018_mid_0_1um_scaffold_3715
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
4 3253 bp 58.22 25.82 97.02
FFSP_062018_mid_0_1um_scaffold_3225
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
4 3683 bp 63.94 25.82 87.97
FFSP_062018_mid_0_1um_scaffold_3841
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (66.67%)
6 3159 bp 58.37 25.83 92.40
FFSP_062018_mid_0_1um_scaffold_2467
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (50%)
4 4668 bp 52.59 25.84 88.62
FFSP_062018_mid_0_1um_scaffold_6076
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (50%)
2 2060 bp 58.45 25.85 79.37
FFSP_062018_mid_0_1um_scaffold_1872
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (75%)
8 5906 bp 60.23 25.86 90.26
FFSP_062018_mid_0_1um_scaffold_2279
Order: Hydrogenophilales (83.33%)
6 4989 bp 64.70 25.86 95.85
FFSP_062018_mid_0_1um_scaffold_5548
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (50%)
2 2239 bp 62.89 25.86 86.96
FFSP_062018_mid_0_1um_scaffold_6284
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
3 2000 bp 56.85 25.88 91.95
FFSP_062018_mid_0_1um_scaffold_1726
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (83.33%)
6 6269 bp 62.72 25.89 97.34
FFSP_062018_mid_0_1um_scaffold_11447
Species: GWE1_Thiobacillus_62_9_curated (50%)
2 1204 bp 59.14 25.91 84.22
FFSP_062018_mid_0_1um_scaffold_10854
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
1 1256 bp 63.46 25.92 97.45
FFSP_062018_mid_0_1um_scaffold_5790
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (50%)
2 2152 bp 60.27 25.93 78.76
FFSP_062018_mid_0_1um_scaffold_3167
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (80%)
5 3748 bp 63.02 25.93 100.21
FFSP_062018_mid_0_1um_scaffold_7210
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (66.67%)
3 1769 bp 60.03 25.95 94.80
FFSP_062018_mid_0_1um_scaffold_4759
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
3 2573 bp 62.92 26.00 97.59
FFSP_062018_mid_0_1um_scaffold_10838
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
3 1257 bp 63.09 26.01 94.99
FFSP_062018_mid_0_1um_scaffold_1152
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (88.89%)
9 8364 bp 57.44 26.02 96.05
FFSP_062018_mid_0_1um_scaffold_3094
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (50%)
6 3811 bp 60.17 26.02 94.23
FFSP_062018_mid_0_1um_scaffold_10857
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
1 1256 bp 64.73 26.04 99.84
FFSP_062018_mid_0_1um_scaffold_9331
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (50%)
2 1427 bp 61.39 26.07 99.23
FFSP_062018_mid_0_1um_scaffold_3428
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (66.67%)
3 3496 bp 62.76 26.09 98.60
FFSP_062018_mid_0_1um_scaffold_2242
Species: GWE1_Thiobacillus_62_9_curated (50%)
4 5065 bp 64.80 26.12 83.93
FFSP_062018_mid_0_1um_scaffold_2283
Order: Hydrogenophilales (60%)
5 4985 bp 63.69 26.12 92.02
FFSP_062018_mid_0_1um_scaffold_2686
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
2 4327 bp 61.59 26.14 89.92
FFSP_062018_mid_0_1um_scaffold_4550
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (80%)
5 2697 bp 60.77 26.14 99.33
FFSP_062018_mid_0_1um_scaffold_3750
Species: GWE1_Thiobacillus_62_9_curated (50%)
4 3224 bp 60.79 26.15 88.49
FFSP_062018_mid_0_1um_scaffold_3512
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (66.67%)
3 3419 bp 60.78 26.15 99.85
FFSP_062018_mid_0_1um_scaffold_4650
Species: GWE1_Thiobacillus_62_9_curated (50%)
4 2635 bp 62.69 26.19 98.25
FFSP_062018_mid_0_1um_scaffold_8372
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
1 1561 bp 60.86 26.23 99.94
FFSP_062018_mid_0_1um_scaffold_2214
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (80%)
5 5127 bp 60.05 26.24 95.96
FFSP_062018_mid_0_1um_scaffold_3091
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (75%)
4 3817 bp 64.27 26.25 101.31
FFSP_062018_mid_0_1um_scaffold_1513
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (85.71%)
7 6973 bp 63.32 26.27 89.23
FFSP_062018_mid_0_1um_scaffold_2396
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (80%)
5 4796 bp 57.59 26.27 92.20
FFSP_062018_mid_0_1um_scaffold_1648
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (55.56%)
9 6506 bp 61.40 26.28 88.81
FFSP_062018_mid_0_1um_scaffold_869
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (92.31%)
13 10010 bp 58.13 26.30 94.95
FFSP_062018_mid_0_1um_scaffold_5267
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
2 2353 bp 53.12 26.39 82.62
FFSP_062018_mid_0_1um_scaffold_3720
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
2 3249 bp 64.88 26.50 99.91
FFSP_062018_mid_0_1um_scaffold_2860
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
3 4103 bp 64.05 26.50 91.84
FFSP_062018_mid_0_1um_scaffold_9474
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
2 1409 bp 66.57 26.61 96.03
FFSP_062018_mid_0_1um_scaffold_3832
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
3 3166 bp 59.07 26.63 98.74
FFSP_062018_mid_0_1um_scaffold_4290
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (60%)
5 2833 bp 63.71 26.69 92.41
FFSP_062018_mid_0_1um_scaffold_3764
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (60%)
5 3212 bp 62.89 26.71 88.36
FFSP_062018_mid_0_1um_scaffold_6150
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
2 2038 bp 64.62 26.72 98.77
FFSP_062018_mid_0_1um_scaffold_3747
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
2 3226 bp 64.82 26.78 98.57
FFSP_062018_mid_0_1um_scaffold_3699
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
4 3264 bp 63.57 26.84 94.76
FFSP_062018_mid_0_1um_scaffold_1704
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (66.67%)
9 6353 bp 62.13 26.87 92.70
Displaying items 701-750 of 800 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.