ggKbase home page

FFSP_072018_bottom_0_1um_scaffold_3281

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
FFSP_072018_bottom_0_1um_scaffold_3281_1
unknown

Not on your lists

comp(3..149)
DNA (147bp) protein (49aa)

This feature has no annotations

FFSP_072018_bottom_0_1um_scaffold_3281_2
unknown

Not on your lists

comp(94..285)
DNA (192bp) protein (64aa)

This feature has no annotations

FFSP_072018_bottom_0_1um_scaffold_3281_3
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(539..1147)
DNA (609bp) protein (203aa)
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
FFSP_072018_bottom_0_1um_scaffold_3281_4
Burkholderiales bacterium GJ-E10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1434..1646)
DNA (213bp) protein (71aa)
YcfA family protein n=1 Tax=Chlorobium phaeobacteroides (strain DSM 266) RepID=A1BGE2_CHLPD
YcfA family protein
YcfA family protein {ECO:0000313|EMBL:BAP88418.1}; TaxID=1469502 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium GJ-E10.;"
FFSP_072018_bottom_0_1um_scaffold_3281_5
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1643..1846)
DNA (204bp) protein (68aa)
hypothetical protein n=1 Tax=Lamprocystis purpurea RepID=UPI00037AE736
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
FFSP_072018_bottom_0_1um_scaffold_3281_6
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1969..3195)
DNA (1227bp) protein (409aa)
dihydrolipoamide dehydrogenase (EC:1.8.1.4)
Pyruvate/2-oxoglutarate dehydrogenase complex dihydrolipoamide dehydrogenase E3 component n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SL16_THIDA
Pyruvate/2-oxoglutarate dehydrogenase complex dihydrolipoamide dehydrogenase E3 component {ECO:0000313|EMBL:AAZ96605.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
FFSP_072018_bottom_0_1um_scaffold_3281_7
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3135..4907)
DNA (1773bp) protein (591aa)
dihydrolipoamide dehydrogenase (EC:1.8.1.4)
pyruvate dehydrogenase n=1 Tax=Thiobacillus denitrificans RepID=UPI00035D2158
Pyruvate/2-oxoglutarate dehydrogenase complex dihydrolipoamide dehydrogenase E3 component {ECO:0000313|EMBL:AAZ96605.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
FFSP_072018_bottom_0_1um_scaffold_3281_8
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5083..6066)
DNA (984bp) protein (328aa)
Pyruvate dehydrogenase E1 beta subunit id=1326796 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
pyruvate dehydrogenase E1 subunit beta
Tax=GWE1_Thiobacillus_62_9_curated
FFSP_072018_bottom_0_1um_scaffold_3281_9
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6076..7077)
DNA (1002bp) protein (334aa)
Dehydrogenase complex, E1 component, alpha subunit id=1326795 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
dehydrogenase complex, E1 component subunit alpha
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
FFSP_072018_bottom_0_1um_scaffold_3281_10
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7192..8061
DNA (870bp) protein (290aa)
leucyl aminopeptidase (EC:3.4.11.1)
peptidase M17 n=1 Tax=Thiobacillus denitrificans RepID=UPI00037AEBBB
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
FFSP_072018_bottom_0_1um_scaffold_3281_11
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8058..8564
DNA (507bp) protein (169aa)
leucyl aminopeptidase (EC:3.4.11.1)
Leucyl aminopeptidase id=1326794 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=GWE1_Thiobacillus_62_9_curated
FFSP_072018_bottom_0_1um_scaffold_3281_12
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8572..9216
DNA (645bp) protein (215aa)
ribosomal large subunit pseudouridine synthase A (EC:5.4.99.-)
Pseudouridine synthase id=1326793 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=GWE1_Thiobacillus_62_9_curated
FFSP_072018_bottom_0_1um_scaffold_3281_13
unknown

Not on your lists

9530..9685
DNA (156bp) protein (52aa)

This feature has no annotations

Displaying 13 items

View Taxonomy