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FFSP_072018_bottom_0_1um_scaffold_227

Search features with annotation key words

Displaying items 1-30 of 47 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
FFSP_072018_bottom_0_1um_scaffold_227_1
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..1274)
DNA (1272bp) protein (424aa)
glucose-6-phosphate 1-dehydrogenase (EC:1.1.1.49)
Glucose-6-phosphate 1-dehydrogenase id=1350218 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=GWE1_Thiobacillus_62_9_curated
FFSP_072018_bottom_0_1um_scaffold_227_2
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1276..2184)
DNA (909bp) protein (303aa)
6-phosphogluconate dehydrogenase (EC:1.1.1.44); K00033 6-phosphogluconate dehydrogenase [EC:1.1.1.44] id=12496688 bin=THIO_MID species=Nitrosomonas europaea genus=Nitrosomonas taxon_order=Nitrosomonadales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
6-phosphogluconate dehydrogenase
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
FFSP_072018_bottom_0_1um_scaffold_227_3
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2313..2948)
DNA (636bp) protein (212aa)
Multiple antibiotic resistance (MarC)-related proteins id=1350216 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
multiple antibiotic resistance (MarC)-like proteins
Tax=GWE1_Thiobacillus_62_9_curated
FFSP_072018_bottom_0_1um_scaffold_227_4
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2979..3680)
DNA (702bp) protein (234aa)
tRNA (guanine-N(7)-)-methyltransferase (EC:2.1.1.33)
tRNA (guanine-N(7)-)-methyltransferase n=1 Tax=Thiobacillus denitrificans RepID=UPI000380F2EC
Tax=GWE1_Thiobacillus_62_9_curated
FFSP_072018_bottom_0_1um_scaffold_227_5
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3683..4486)
DNA (804bp) protein (268aa)
thiazole synthase n=1 Tax=Thiobacillus denitrificans RepID=UPI00036B07CD
thiG; thiazole synthase
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
FFSP_072018_bottom_0_1um_scaffold_227_6
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4574..4777)
DNA (204bp) protein (68aa)
thiamine biosynthesis protein ThiS n=1 Tax=Thiobacillus thioparus RepID=UPI0003600A30
thiamine-biosynthesis protein ThiS
Tax=GWE1_Thiobacillus_62_9_curated
FFSP_072018_bottom_0_1um_scaffold_227_trna_1
unknown

Not on your lists

4837..4907
DNA (71bp)
transferRNA Gly
FFSP_072018_bottom_0_1um_scaffold_227_7
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4989..6956
DNA (1968bp) protein (656aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00036C5CB8
hypothetical protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
FFSP_072018_bottom_0_1um_scaffold_227_8
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7209..9410
DNA (2202bp) protein (734aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00037C4702
Uncharacterized protein {ECO:0000313|EMBL:AAZ98082.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
hypothetical protein
FFSP_072018_bottom_0_1um_scaffold_227_9
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9476..10510
DNA (1035bp) protein (345aa)
A/G-specific adenine glycosylase (EC:3.2.2.-)
adenine glycosylase n=1 Tax=Thiobacillus denitrificans RepID=UPI0003672504
Tax=GWE1_Thiobacillus_62_9_curated
FFSP_072018_bottom_0_1um_scaffold_227_10
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10596..10919
DNA (324bp) protein (108aa)
putative dissimilatory sulfite reductase id=12493797 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
dissimilatory sulfite reductase
Tax=GWE1_Thiobacillus_62_9_curated
FFSP_072018_bottom_0_1um_scaffold_227_11
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11150..11899)
DNA (750bp) protein (250aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000373D4EC
ribonuclease I
Putative ribonuclease I {ECO:0000313|EMBL:AAZ98086.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
FFSP_072018_bottom_0_1um_scaffold_227_12
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12003..12926
DNA (924bp) protein (308aa)
branched-chain amino acid aminotransferase (EC:2.6.1.42)
Branched-chain amino acid aminotransferase I id=1338656 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
FFSP_072018_bottom_0_1um_scaffold_227_13
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12938..13141
DNA (204bp) protein (68aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037F3BB2
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
FFSP_072018_bottom_0_1um_scaffold_227_14
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13183..14361)
DNA (1179bp) protein (393aa)
coproporphyrinogen III oxidase (EC:1.3.99.22)
coproporphyrinogen III oxidase n=1 Tax=Thiobacillus thioparus RepID=UPI0003637046
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
FFSP_072018_bottom_0_1um_scaffold_227_15
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(14354..14944)
DNA (591bp) protein (197aa)
Non-canonical purine NTP pyrophosphatase id=1342775 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
deoxyribonucleotide triphosphate pyrophosphatase
Tax=GWE1_Thiobacillus_62_9_curated
FFSP_072018_bottom_0_1um_scaffold_227_16
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15064..15795)
DNA (732bp) protein (244aa)
RNAse PH (EC:2.7.7.56); K00989 ribonuclease PH [EC:2.7.7.56] id=12493757 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
RNAse PH (EC:2.7.7.56)
Ribonuclease PH {ECO:0000256|HAMAP-Rule:MF_00564, ECO:0000256|SAAS:SAAS00104182}; Short=RNase PH {ECO:0000256|HAMAP-Rule:MF_00564};; EC=2.7.7.56 {ECO:0000256|HAMAP-Rule:MF_00564, ECO:0000256|SAAS:SAAS00104188};; tRNA nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_00564}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
FFSP_072018_bottom_0_1um_scaffold_227_17
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15870..16778)
DNA (909bp) protein (303aa)
Serine/threonine protein phosphatase id=1342773 bin=GWE1_T_denit_62_9 species=unknown genus=unknown taxon_order=unknown taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Ser/Thr phosphatase
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
FFSP_072018_bottom_0_1um_scaffold_227_18
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16789..17733)
DNA (945bp) protein (315aa)
Serine/Threonine protein kinase id=1342772 bin=GWE1_T_denit_62_9 species=unknown genus=unknown taxon_order=unknown taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Serine/threonine protein kinase
Tax=GWE1_Thiobacillus_62_9_curated
FFSP_072018_bottom_0_1um_scaffold_227_19
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17848..18702
DNA (855bp) protein (285aa)
stress-induced protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003820D8A
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
FFSP_072018_bottom_0_1um_scaffold_227_20
Candidatus Accumulibacter sp. SK-11, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18892..20160
DNA (1269bp) protein (423aa)
Phage integrase family protein n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1W4J2_ACISJ
Prophage CP4-57 integrase {ECO:0000313|EMBL:EXI76871.1}; TaxID=1454000 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. SK-11.;"
phage integrase family protein
FFSP_072018_bottom_0_1um_scaffold_227_21
Candidatus Competibacter denitrificans, Candidatus Competibacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20164..20589
DNA (426bp) protein (142aa)
Uncharacterized protein {ECO:0000313|EMBL:CDI01527.1}; TaxID=1400863 species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Competibacter.;" source="Candidatus Competibacter denitrificans Run_A_D11.;"
FFSP_072018_bottom_0_1um_scaffold_227_22
BJP_IG2103_Dechloromonas_63_51, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20700..20930
DNA (231bp) protein (77aa)
Prophage CP4-57 regulatory n=1 Tax=Gallionella capsiferriformans (strain ES-2) RepID=D9SHV3_GALCS
prophage CP4-57 regulatory
Tax=BJP_IG2103_Dechloromonas_63_51
FFSP_072018_bottom_0_1um_scaffold_227_23
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20951..23377
DNA (2427bp) protein (809aa)
Uncharacterized protein n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MGX9_ACIET
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACM34607.1}; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (strain TPSY) (Diaphorobacter sp. (strain TPSY)).;"
FFSP_072018_bottom_0_1um_scaffold_227_24
Alcanivorax hongdengensis, Alcanivorax, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23743..24180)
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Alcanivorax hongdengensis A-11-3 RepID=L0WEU6_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EKF74682.1}; TaxID=1177179 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Alcanivoracaceae; Alcanivorax.;" source="Alcanivorax hongdengensis A-11-3.;"
FFSP_072018_bottom_0_1um_scaffold_227_25
RIFOXYD12_FULL_Gammaproteobacteria_61_37_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24227..24445)
DNA (219bp) protein (73aa)
Tax=RIFOXYD12_FULL_Gammaproteobacteria_61_37_curated
FFSP_072018_bottom_0_1um_scaffold_227_26
Magnetospirillum magnetotacticum, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24442..26307)
DNA (1866bp) protein (622aa)
TPR repeat-containing protein n=1 Tax=Magnetospirillum sp. SO-1 RepID=M2ZBQ2_9PROT
Uncharacterized protein {ECO:0000313|EMBL:KIL98705.1}; TaxID=272627 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum magnetotacticum MS-1.;"
TPR repeat-containing protein
FFSP_072018_bottom_0_1um_scaffold_227_27
unknown

Not on your lists

comp(26304..26543)
DNA (240bp) protein (80aa)

This feature has no annotations

FFSP_072018_bottom_0_1um_scaffold_227_28
unknown

Not on your lists

comp(26586..26990)
DNA (405bp) protein (135aa)

This feature has no annotations

FFSP_072018_bottom_0_1um_scaffold_227_29

Not on your lists

comp(26987..27406)
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2F718_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKE17372.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
exported protein of unknown function
Displaying items 1-30 of 47 in total

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