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FFSP_072018_bottom_0_1um_scaffold_469

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
FFSP_072018_bottom_0_1um_scaffold_469_1
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..292)
DNA (291bp) protein (97aa)
Transmembrane proetin, twin-arginine translocation pathway signal id=1345672 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
transmembrane protein
Tax=GWE1_Thiobacillus_62_9_curated
FFSP_072018_bottom_0_1um_scaffold_469_2
Herbaspirillum sp. TSA66, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

869..2293
DNA (1425bp) protein (475aa)
hypothetical protein n=1 Tax=Lamprocystis purpurea RepID=UPI00036B5B0B
Homospermidine synthase {ECO:0000313|EMBL:KIF80113.1}; TaxID=709839 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. TSA66.;"
homospermidine synthase
FFSP_072018_bottom_0_1um_scaffold_469_3
R_Deltaproteobacteria_43_9, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(2370..2645)
DNA (276bp) protein (92aa)
Uncharacterized protein n=1 Tax=Thioalkalivibrio nitratireducens (strain DSM 14787 / UNIQEM 213 / ALEN2) RepID=L0DUT9_THIND
protein of unknown function DUF1458
Tax=RIFCSPHIGHO2_12_FULL_Deltaproteobacteria_43_9_curated
FFSP_072018_bottom_0_1um_scaffold_469_4
Nitrosococcus watsonii, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2844..3602)
DNA (759bp) protein (253aa)
Putative uncharacterized protein n=1 Tax=Nitrosococcus watsoni (strain C-113) RepID=D8K765_NITWC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADJ28742.1}; TaxID=105559 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus watsoni (strain C-113).;"
FFSP_072018_bottom_0_1um_scaffold_469_5
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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3796..7125
DNA (3330bp) protein (1110aa)
Alpha amylase, catalytic subdomain n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SJM9_THIDA
alpha amylase
Alpha amylase, catalytic subdomain {ECO:0000313|EMBL:AAZ97125.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
FFSP_072018_bottom_0_1um_scaffold_469_6
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7160..8953
DNA (1794bp) protein (598aa)
Malto-oligosyltrehalose trehalohydrolase {ECO:0000256|PIRNR:PIRNR006337}; Short=MTHase {ECO:0000256|PIRNR:PIRNR006337};; EC=3.2.1.141 {ECO:0000256|PIRNR:PIRNR006337};; 4-alpha-D-((1->4)-alpha-D-glucano)trehalose trehalohydrolase {ECO:0000256|PIRNR:PIRNR006337}; Maltooligosyl trehalose trehalohydrolase {ECO:0000256|PIRNR:PIRNR006337}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
Malto-oligosyltrehalose trehalohydrolase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DMN0_9PROT
alpha amylase
FFSP_072018_bottom_0_1um_scaffold_469_7
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8950..14109
DNA (5160bp) protein (1720aa)
4-alpha-glucanotransferase {ECO:0000256|RuleBase:RU361207, ECO:0000313|EMBL:KIO47904.1}; EC=2.4.1.25 {ECO:0000256|RuleBase:RU361207};; Amylomaltase {ECO:0000256|RuleBase:RU361207}; Disproportionating enzyme {ECO:0000256|RuleBase:RU361207}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
Alpha amylase, catalytic subdomain n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SJM7_THIDA
bifunctional 4-alpha-glucanotransferase/malto-oligosyltrehalose synthase
FFSP_072018_bottom_0_1um_scaffold_469_8
Nitrosomonas europaea, Nitrosomonas, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14309..14899
DNA (591bp) protein (197aa)
Uncharacterized protein n=1 Tax=Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298) RepID=Q82TN1_NITEU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAD85764.1}; TaxID=228410 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298).;"
FFSP_072018_bottom_0_1um_scaffold_469_9
Desulfurispirillum indicum, Desulfurispirillum, Chrysiogenales, Chrysiogenetes, Chrysiogenetes, Bacteria

Not on your lists

comp(15019..15438)
DNA (420bp) protein (140aa)
host cell attachment-required protein n=1 Tax=Mariprofundus ferrooxydans RepID=UPI00035EB348
Host attachment protein
Host attachment protein {ECO:0000313|EMBL:ADU65784.1}; TaxID=653733 species="Bacteria; Chrysiogenetes; Chrysiogenales; Chrysiogenaceae; Desulfurispirillum.;" source="Desulfurispirillum indicum (strain ATCC BAA-1389 / S5).;"
FFSP_072018_bottom_0_1um_scaffold_469_10
R_Rhodocyclales_63_24, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16162..16620
DNA (459bp) protein (153aa)
Transposase n=1 Tax=Nitrococcus mobilis Nb-231 RepID=A4BMR3_9GAMM
ISL3 family transposase
Tax=RIFCSPLOWO2_02_FULL_Rhodocyclales_63_24_curated
FFSP_072018_bottom_0_1um_scaffold_469_11
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17027..18148
DNA (1122bp) protein (374aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000367CCBF
hypothetical protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
FFSP_072018_bottom_0_1um_scaffold_469_12
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18145..18993
DNA (849bp) protein (283aa)
Ni/Fe hydrogenase subunit gamma n=1 Tax=Thiobacillus thioparus RepID=UPI000374B60C
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
FFSP_072018_bottom_0_1um_scaffold_469_13
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19151..19942
DNA (792bp) protein (264aa)
Putative uncharacterized protein id=1367904 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
FFSP_072018_bottom_0_1um_scaffold_469_14
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19935..21236
DNA (1302bp) protein (434aa)
Putative uncharacterized protein id=1367905 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
FFSP_072018_bottom_0_1um_scaffold_469_15
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21233..21697
DNA (465bp) protein (155aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00035E3C39
vhtD; hydrogenase expression/formation protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
Displaying 15 items

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