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FFSP_072018_bottom_0_1um_scaffold_861

Search features with annotation key words

Displaying items 1-30 of 39 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
FFSP_072018_bottom_0_1um_scaffold_861_1
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..1393
DNA (1392bp) protein (464aa)
lysyl-tRNA synthetase, class-2; K04567 lysyl-tRNA synthetase, class II [EC:6.1.1.6] id=12494622 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
lysyl-tRNA synthetase
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
FFSP_072018_bottom_0_1um_scaffold_861_2
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1465..1815
DNA (351bp) protein (117aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037B360B
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ96845.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
FFSP_072018_bottom_0_1um_scaffold_861_3

Not on your lists

1909..4449
DNA (2541bp) protein (847aa)
Aconitate hydratase (Citrate hydro-lyase) (Aconitase) {ECO:0000313|EMBL:CBI09861.1}; EC=4.2.1.3 {ECO:0000313|EMBL:CBI09861.1};; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00035F58A9
aconitate hydratase 1
FFSP_072018_bottom_0_1um_scaffold_861_4
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4534..6741)
DNA (2208bp) protein (736aa)
Diguanylate cyclase/phosphodiesterase id=1363613 bin=GWE1_T_denit_62_9 species=unknown genus=Methylotenera taxon_order=Methylophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
diguanylate cyclase/phosphodiesterase
Tax=GWE1_Thiobacillus_62_9_curated
FFSP_072018_bottom_0_1um_scaffold_861_5
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6756..7019)
DNA (264bp) protein (88aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00037E18B3
hypothetical protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
FFSP_072018_bottom_0_1um_scaffold_861_6
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7039..8142)
DNA (1104bp) protein (368aa)
histidine kinase n=1 Tax=Thiobacillus denitrificans RepID=UPI00036C9778
hypothetical protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
FFSP_072018_bottom_0_1um_scaffold_861_7
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8205..9170
DNA (966bp) protein (322aa)
prolyl aminopeptidase (EC:3.4.11.5)
Proline iminopeptidase id=1363608 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=GWE1_Thiobacillus_62_9_curated
FFSP_072018_bottom_0_1um_scaffold_861_8
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9167..10030
DNA (864bp) protein (288aa)
Putative thioredoxin protein id=1363607 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
thioredoxin protein
Tax=GWE1_Thiobacillus_62_9_curated
FFSP_072018_bottom_0_1um_scaffold_861_9
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10027..10773
DNA (747bp) protein (249aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00037092A4
transmembrane protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
FFSP_072018_bottom_0_1um_scaffold_861_10
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10790..11158)
DNA (369bp) protein (123aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00037CF2A1
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
FFSP_072018_bottom_0_1um_scaffold_861_11
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11186..12052)
DNA (867bp) protein (289aa)
Probable membrane protein id=1362779 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
FFSP_072018_bottom_0_1um_scaffold_861_12
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12191..12433
DNA (243bp) protein (81aa)
exodeoxyribonuclease VII small subunit (EC:3.1.11.6)
exodeoxyribonuclease n=1 Tax=Thiobacillus thioparus RepID=UPI00037105D8
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
FFSP_072018_bottom_0_1um_scaffold_861_13
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12426..13313
DNA (888bp) protein (296aa)
farnesyl-diphosphate synthase (EC:2.5.1.10)
Polyprenyl synthetase id=1362782 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=GWE1_Thiobacillus_62_9_curated
FFSP_072018_bottom_0_1um_scaffold_861_14
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13315..15174
DNA (1860bp) protein (620aa)
1-deoxy-D-xylulose-5-phosphate synthase (EC:2.2.1.7)
1-deoxy-D-xylulose-5-phosphate synthase n=1 Tax=Thiobacillus denitrificans RepID=UPI00037EE094
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
FFSP_072018_bottom_0_1um_scaffold_861_15
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15252..16064
DNA (813bp) protein (271aa)
GTP cyclohydrolase (EC:3.5.4.16)
GTP cyclohydrolase folE2 id=1345306 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=GWE1_Thiobacillus_62_9_curated
FFSP_072018_bottom_0_1um_scaffold_861_16
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16134..16781)
DNA (648bp) protein (216aa)
Putative uncharacterized protein id=1345307 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
FFSP_072018_bottom_0_1um_scaffold_861_17
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16783..17493
DNA (711bp) protein (237aa)
glutamine amidotransferase n=1 Tax=Thiobacillus thioparus RepID=UPI00035E22D2
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
FFSP_072018_bottom_0_1um_scaffold_861_18
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17599..17856
DNA (258bp) protein (86aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI0003793D57
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ96828.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
FFSP_072018_bottom_0_1um_scaffold_861_19
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18023..19240
DNA (1218bp) protein (406aa)
sat; sulfate adenylyltransferase (EC:2.7.7.4)
sulfate adenylyltransferase n=1 Tax=Thiobacillus denitrificans RepID=UPI00037AE62D
Tax=GWE1_Thiobacillus_62_9_curated
FFSP_072018_bottom_0_1um_scaffold_861_20
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19424..19897
DNA (474bp) protein (158aa)
adenylylsulfate reductase subunit beta n=1 Tax=Thiobacillus thioparus RepID=UPI000378694E
aprB; adenylylsulfate reductase subunit beta
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
FFSP_072018_bottom_0_1um_scaffold_861_21
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19925..21853
DNA (1929bp) protein (643aa)
adenylylsulfate reductase subunit alpha (EC:1.8.99.2)
adenylylsulfate reductase subunit alpha n=1 Tax=Thiobacillus thioparus RepID=UPI0003826AC9
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
FFSP_072018_bottom_0_1um_scaffold_861_22
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22077..22988
DNA (912bp) protein (304aa)
50S rRNA methyltransferase n=1 Tax=Thiobacillus thioparus RepID=UPI00035D6203
hypothetical protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
FFSP_072018_bottom_0_1um_scaffold_861_23
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23146..23619
DNA (474bp) protein (158aa)
Putative uncharacterized protein id=1351379 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
FFSP_072018_bottom_0_1um_scaffold_861_24
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23634..24446
DNA (813bp) protein (271aa)
Nitric oxide reductase activation protein NorQ id=1351378 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
nitric oxide reductase activation protein NorQ
Tax=GWE1_Thiobacillus_62_9_curated
FFSP_072018_bottom_0_1um_scaffold_861_25
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24457..26589
DNA (2133bp) protein (711aa)
nitric oxide reductase activation protein NorD n=1 Tax=Thiobacillus denitrificans RepID=UPI00036C113C
nitric oxide reductase activation protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
FFSP_072018_bottom_0_1um_scaffold_861_26
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26577..26786
DNA (210bp) protein (70aa)
Putative uncharacterized protein id=1351375 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
FFSP_072018_bottom_0_1um_scaffold_861_27
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26783..27865)
DNA (1083bp) protein (361aa)
GTPase obg id=1351374 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
obgE; GTPase ObgE
Tax=GWE1_Thiobacillus_62_9_curated
FFSP_072018_bottom_0_1um_scaffold_861_28
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(27964..28233)
DNA (270bp) protein (90aa)
50S ribosomal protein L27 n=1 Tax=Thiobacillus denitrificans RepID=UPI00036A448F
rpmA; 50S ribosomal protein L27
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
FFSP_072018_bottom_0_1um_scaffold_861_29
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(28246..28557)
DNA (312bp) protein (104aa)
50S ribosomal protein L21 id=1351372 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
50S ribosomal protein L21
Tax=GWE1_Thiobacillus_62_9_curated
FFSP_072018_bottom_0_1um_scaffold_861_30
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28734..29702
DNA (969bp) protein (323aa)
trans-hexaprenyltranstransferase (EC:2.5.1.30)
Trans-hexaprenyltranstransferase id=1351371 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=GWE1_Thiobacillus_62_9_curated
Displaying items 1-30 of 39 in total

View Taxonomy