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FFSP_072018_bottom_0_1um_scaffold_1258

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
FFSP_072018_bottom_0_1um_scaffold_1258_1
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(361..1554)
DNA (1194bp) protein (398aa)
tyrosyl-tRNA synthetase (EC:6.1.1.1)
Tyrosine--tRNA ligase id=1351109 bin=GWE1_T_denit_62_9 species=uncultured beta proteobacterium genus=unknown taxon_order=unknown taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=GWE1_Thiobacillus_62_9_curated
FFSP_072018_bottom_0_1um_scaffold_1258_2
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1712..3028
DNA (1317bp) protein (439aa)
Membrane protein related to metalloendopeptidases id=1351108 bin=GWE1_T_denit_62_9 species=uncultured beta proteobacterium genus=unknown taxon_order=unknown taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
peptidase
Tax=GWE1_Thiobacillus_62_9_curated
FFSP_072018_bottom_0_1um_scaffold_1258_3
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3025..4143
DNA (1119bp) protein (373aa)
anhydro-N-acetylmuramic acid kinase n=1 Tax=Thiobacillus denitrificans RepID=UPI00036A220D
anmK; anhydro-N-acetylmuramic acid kinase
Tax=GWE1_Thiobacillus_62_9_curated
FFSP_072018_bottom_0_1um_scaffold_1258_4
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4228..4578)
DNA (351bp) protein (117aa)
iron--sulfur cluster insertion protein ErpA n=1 Tax=Thiobacillus thioparus RepID=UPI00036830C6
HesB-like protein
Tax=GWE1_Thiobacillus_62_9_curated
FFSP_072018_bottom_0_1um_scaffold_1258_5
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4708..5736)
DNA (1029bp) protein (343aa)
argC; N-acetyl-gamma-glutamyl-phosphate reductase (EC:1.2.1.38)
N-acetyl-gamma-glutamyl-phosphate reductase n=1 Tax=Thiobacillus thioparus RepID=UPI00037B0D5A
Tax=GWE1_Thiobacillus_62_9_curated
FFSP_072018_bottom_0_1um_scaffold_1258_6
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(5869..6261)
DNA (393bp) protein (131aa)
30S ribosomal protein S9 id=1351104 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
rpsI; 30S ribosomal protein S9
Tax=GWE1_Thiobacillus_62_9_curated
FFSP_072018_bottom_0_1um_scaffold_1258_7
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(6258..6704)
DNA (447bp) protein (149aa)
50S ribosomal protein L13 n=1 Tax=Thiobacillus thioparus RepID=UPI000375671B
rplM; 50S ribosomal protein L13
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
FFSP_072018_bottom_0_1um_scaffold_1258_8
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6825..7601
DNA (777bp) protein (259aa)
Probable transmembrane protein n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SLK2_THIDA
transmembrane protein
Probable transmembrane protein {ECO:0000313|EMBL:AAZ96405.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
FFSP_072018_bottom_0_1um_scaffold_1258_9
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7598..8014
DNA (417bp) protein (139aa)
OsmC/Ohr family protein id=1360777 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
OsmC/Ohr family protein
Tax=GWE1_Thiobacillus_62_9_curated
FFSP_072018_bottom_0_1um_scaffold_1258_10
Sulfuricella denitrificans, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8225..8383)
DNA (159bp) protein (53aa)
Uncharacterized protein n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6ABC6_9PROT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAN34563.1}; TaxID=1163617 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella denitrificans skB26.;"
FFSP_072018_bottom_0_1um_scaffold_1258_11

Not on your lists

comp(8873..9289)
DNA (417bp) protein (139aa)
PilT domain-containing protein n=1 Tax=mine drainage metagenome RepID=T1D7U0_9ZZZZ
PilT domain-containing protein {ECO:0000313|EMBL:EQD77489.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein
FFSP_072018_bottom_0_1um_scaffold_1258_12

Not on your lists

comp(9289..9543)
DNA (255bp) protein (85aa)
Prevent-host-death family protein n=1 Tax=mine drainage metagenome RepID=T1C8V8_9ZZZZ
Prevent-host-death family protein {ECO:0000313|EMBL:EQD77488.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
prevent-host-death family protein
FFSP_072018_bottom_0_1um_scaffold_1258_13
RBG_16_Betaproteobacteria_56_24_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10029..10700)
DNA (672bp) protein (224aa)
Uncharacterized protein n=1 Tax=Alcanivorax sp. P2S70 RepID=U7FSU5_9GAMM
transposase
Tax=RBG_16_Betaproteobacteria_56_24_curated
FFSP_072018_bottom_0_1um_scaffold_1258_14
unknown

Not on your lists

10713..10922
DNA (210bp) protein (70aa)

This feature has no annotations

Displaying 14 items

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