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FFSP_072018_bottom_0_1um_scaffold_3444

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
FFSP_072018_bottom_0_1um_scaffold_3444_1
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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1..114
DNA (114bp) protein (38aa)
GAF sensor signal transduction histidine kinase (EC:2.7.3.-)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
GAF Sensor Signal Transduction Histidine Kinase n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SG40_THIDA
FFSP_072018_bottom_0_1um_scaffold_3444_2
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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161..826
DNA (666bp) protein (222aa)
LuxR family transcriptional regulator n=1 Tax=Thiobacillus denitrificans RepID=UPI000376AAD5
LuxR family transcriptional regulator
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
FFSP_072018_bottom_0_1um_scaffold_3444_3
unknown

Not on your lists

comp(1035..1298)
DNA (264bp) protein (88aa)

This feature has no annotations

FFSP_072018_bottom_0_1um_scaffold_3444_4
Acinetobacter bouvetii, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1647..1976
DNA (330bp) protein (110aa)
Uncharacterized protein n=1 Tax=Acinetobacter bouvetii DSM 14964 = CIP 107468 RepID=N9DN32_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:ENV84049.1}; TaxID=1120925 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter.;" source="Acinetobacter bouvetii DSM 14964 = CIP 107468.;"
FFSP_072018_bottom_0_1um_scaffold_3444_5
GWA2_Gallionellales_60_142_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2226..3788)
DNA (1563bp) protein (521aa)
AMP-dependent synthetase/ligase (EC:5.1.1.11) id=12496431 bin=THIO_MID species=Desulfovibrio sp. Dsv1 genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
D-alanine--poly(phosphoribitol) ligase subunit 1
Tax=GWA2_Gallionellales_60_142_curated
FFSP_072018_bottom_0_1um_scaffold_3444_6
GWA2_Gallionellales_60_142_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3808..4308)
DNA (501bp) protein (167aa)
3-ketoacyl-ACP reductase (EC:1.1.1.100) id=12496430 bin=THIO_MID species=Cupriavidus basilensis genus=Cupriavidus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
3-ketoacyl-ACP reductase (EC:1.1.1.100)
Tax=GWA2_Gallionellales_60_142_curated
FFSP_072018_bottom_0_1um_scaffold_3444_7
GWA2_Gallionellales_60_142_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4305..4484)
DNA (180bp) protein (60aa)
acyl carrier protein id=12496429 bin=THIO_MID species=Aeromonas veronii genus=Aeromonas taxon_order=Aeromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
acyl carrier protein
Tax=GWA2_Gallionellales_60_142_curated
FFSP_072018_bottom_0_1um_scaffold_3444_8
GWA2_Gallionellales_60_142_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4540..5625)
DNA (1086bp) protein (362aa)
hypothetical protein id=12496428 bin=THIO_MID species=Rhodospirillum rubrum genus=Rhodospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
hypothetical protein
Tax=GWA2_Gallionellales_60_142_curated
FFSP_072018_bottom_0_1um_scaffold_3444_9

Not on your lists

comp(5644..6660)
DNA (1017bp) protein (339aa)
methyltransferase type 11 id=12496427 bin=THIO_MID species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=THIO_MID organism_group=Betaproteobacteria
Putative Methyltransferase type 11 {ECO:0000313|EMBL:CBH74083.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
type 11 methyltransferase
FFSP_072018_bottom_0_1um_scaffold_3444_10

Not on your lists

6847..7545
DNA (699bp) protein (233aa)
hexapaptide repeat-containing transferase id=12496426 bin=THIO_MID species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=THIO_MID organism_group=Betaproteobacteria
Putative Transferase hexapeptide repeat containing protein {ECO:0000313|EMBL:CBH74080.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
transferase
FFSP_072018_bottom_0_1um_scaffold_3444_11
RBG_13_Ignavibacteria_36_8_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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7588..8556
DNA (969bp) protein (323aa)
hypothetical protein id=12496425 bin=THIO_MID species=Vibrio genomosp. F10 genus=Vibrio taxon_order=Vibrionales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
hypothetical protein
Tax=RBG_13_Ignavibacteria_36_8_curated
FFSP_072018_bottom_0_1um_scaffold_3444_12
Shewanella sediminis, Shewanella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8583..9176)
DNA (594bp) protein (198aa)
hypothetical protein id=12496424 bin=THIO_MID species=Shewanella sediminis genus=Shewanella taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABV37601.1}; TaxID=425104 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Shewanellaceae; Shewanella.;" source="Shewanella sediminis (strain HAW-EB3).;"
Displaying 12 items

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