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FFSP_072018_bottom_0_1um_scaffold_857

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
FFSP_072018_bottom_0_1um_scaffold_857_1
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(547..954)
DNA (408bp) protein (136aa)
N-acetylglucosamine kinase (EC:2.7.1.59)
ROK family protein id=1336271 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=GWE1_Thiobacillus_62_9_curated
FFSP_072018_bottom_0_1um_scaffold_857_2
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1411..2142
DNA (732bp) protein (244aa)
Probable transcriptional regulatory protein Tbd_2215 id=1336269 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
FFSP_072018_bottom_0_1um_scaffold_857_3
GWA2_Gallionellales_60_18_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2191..2415
DNA (225bp) protein (75aa)
Prevent-host-death family protein n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5C1F7_NITHN
prevent-host-death family protein
Tax=GWA2_Gallionellales_60_18_curated
FFSP_072018_bottom_0_1um_scaffold_857_4
Acaryochloris marina, Acaryochloris, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

2408..2827
DNA (420bp) protein (140aa)
twitching motility protein PilT n=1 Tax=Acaryochloris sp. CCMEE 5410 RepID=UPI000248505A
PilT domain-containing protein
PIN domain protein {ECO:0000313|EMBL:ABW31643.1}; TaxID=329726 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Acaryochloris.;" source="Acaryochloris marina (strain MBIC 11017).;"
FFSP_072018_bottom_0_1um_scaffold_857_5
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2833..3348
DNA (516bp) protein (172aa)
Crossover junction endodeoxyribonuclease RuvC id=1336268 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
ruvC; Holliday junction resolvase
Tax=GWE1_Thiobacillus_62_9_curated
FFSP_072018_bottom_0_1um_scaffold_857_6
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3362..3937
DNA (576bp) protein (192aa)
Holliday junction DNA helicase RuvA n=1 Tax=Thiobacillus thioparus RepID=UPI000360F7B7
DNA recombination protein, RuvA
Tax=GWE1_Thiobacillus_62_9_curated
FFSP_072018_bottom_0_1um_scaffold_857_7
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3943..5442
DNA (1500bp) protein (500aa)
Putative diguanylate cyclase (GGDEF domain) n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SGT2_THIDA
diguanylate cyclase
Putative diguanylate cyclase (GGDEF domain) {ECO:0000313|EMBL:AAZ98165.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
FFSP_072018_bottom_0_1um_scaffold_857_8
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5475..6503
DNA (1029bp) protein (343aa)
ruvB; Holliday junction DNA helicase RuvB (EC:3.1.22.4)
Holliday junction DNA helicase RuvB n=1 Tax=Thiobacillus thioparus RepID=UPI0003673603
Tax=GWE1_Thiobacillus_62_9_curated
FFSP_072018_bottom_0_1um_scaffold_857_9
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6500..6907
DNA (408bp) protein (136aa)
4-hydroxybenzoyl-CoA thioesterase id=1336263 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
4-hydroxybenzoyl-CoA thioesterase
Tax=GWE1_Thiobacillus_62_9_curated
FFSP_072018_bottom_0_1um_scaffold_857_10
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6904..7596
DNA (693bp) protein (231aa)
MotA/TolQ/ExbB proton channel family id=1336262 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
MotA/TolQ/ExbB proton channel family protein
Tax=GWE1_Thiobacillus_62_9_curated
FFSP_072018_bottom_0_1um_scaffold_857_11
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7601..8011
DNA (411bp) protein (137aa)
biopolymer transporter ExbD n=1 Tax=Thiobacillus denitrificans RepID=UPI0003725F1A
biopolymer transport protein ExbD/TolR
Tax=GWE1_Thiobacillus_62_9_curated
FFSP_072018_bottom_0_1um_scaffold_857_12
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8008..8853
DNA (846bp) protein (282aa)
Putative TonB protein id=1336260 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
TonB protein
Tax=GWE1_Thiobacillus_62_9_curated
FFSP_072018_bottom_0_1um_scaffold_857_13
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8953..10227
DNA (1275bp) protein (425aa)
Protein TolB id=1336259 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
tolB; translocation protein TolB
Tax=GWE1_Thiobacillus_62_9_curated
FFSP_072018_bottom_0_1um_scaffold_857_14
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10304..10858
DNA (555bp) protein (185aa)
Outer membrane protein, porin-associated lipoprotein id=1336258 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
outer membrane protein, porin-associated lipoprotein
Tax=GWE1_Thiobacillus_62_9_curated
FFSP_072018_bottom_0_1um_scaffold_857_15
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10845..11636
DNA (792bp) protein (264aa)
Putative uncharacterized protein id=1336257 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
TPR repeat-containing protein
Tax=GWE1_Thiobacillus_62_9_curated
FFSP_072018_bottom_0_1um_scaffold_857_16
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11643..12293
DNA (651bp) protein (217aa)
7-carboxy-7-deazaguanine synthase n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SGT7_THIDA
radical activating enzyme
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
FFSP_072018_bottom_0_1um_scaffold_857_17
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12290..12958
DNA (669bp) protein (223aa)
7-cyano-7-deazaguanine synthase id=1336255 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
ExsB ATPase
Tax=GWE1_Thiobacillus_62_9_curated
FFSP_072018_bottom_0_1um_scaffold_857_trna_1
unknown

Not on your lists

13098..13170
DNA (73bp)
transferRNA Lys
FFSP_072018_bottom_0_1um_scaffold_857_18
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13448..13882
DNA (435bp) protein (145aa)
hypothetical protein n=1 Tax=Methyloversatilis universalis RepID=UPI000360F104
type IV secretion system prepilin
Type IV secretion system prepilin {ECO:0000313|EMBL:ADG32570.1}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
FFSP_072018_bottom_0_1um_scaffold_857_19
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14006..14374
DNA (369bp) protein (123aa)
Putative O-antigen polymerase n=1 Tax=mine drainage metagenome RepID=E6QR06_9ZZZZ
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
Displaying 20 items

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