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FFSP_072018_bottom_0_1um_scaffold_1310

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
FFSP_072018_bottom_0_1um_scaffold_1310_1
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..815
DNA (813bp) protein (271aa)
ligD; ATP-dependent DNA ligase (EC:6.5.1.1)
DNA ligase, ATP-dependent, putative n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SGP7_THIDA
DNA ligase, ATP-dependent, putative {ECO:0000313|EMBL:AAZ98200.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
FFSP_072018_bottom_0_1um_scaffold_1310_2
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

948..1430
DNA (483bp) protein (161aa)
Putative uncharacterized protein n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SGP6_THIDA
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
FFSP_072018_bottom_0_1um_scaffold_1310_3
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1477..1773)
DNA (297bp) protein (99aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00037A5E0F
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
FFSP_072018_bottom_0_1um_scaffold_1310_4
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1965..2516)
DNA (552bp) protein (184aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000362CD98
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
FFSP_072018_bottom_0_1um_scaffold_1310_5
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2641..2856)
DNA (216bp) protein (72aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000377657B
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
FFSP_072018_bottom_0_1um_scaffold_1310_6
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2921..3235)
DNA (315bp) protein (105aa)
transporter n=1 Tax=Thiobacillus thioparus RepID=UPI00035DF00F
transport-associated
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
FFSP_072018_bottom_0_1um_scaffold_1310_7
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3566..4735)
DNA (1170bp) protein (390aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00036D2CBC
permease
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
FFSP_072018_bottom_0_1um_scaffold_1310_8
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4972..5358)
DNA (387bp) protein (129aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037BE557
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
FFSP_072018_bottom_0_1um_scaffold_1310_9
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5399..6100)
DNA (702bp) protein (234aa)
superoxide dismutase (EC:1.15.1.1)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037D3FDC
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
FFSP_072018_bottom_0_1um_scaffold_1310_10
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6162..8255)
DNA (2094bp) protein (698aa)
catalase (EC:1.11.1.6)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037FEF56
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
FFSP_072018_bottom_0_1um_scaffold_1310_11
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8374..8769)
DNA (396bp) protein (132aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00035D8096
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
FFSP_072018_bottom_0_1um_scaffold_1310_12
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8994..10196)
DNA (1203bp) protein (401aa)
Putative glucose-fructose oxidoreductase oxidoreductase protein n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SGN6_THIDA
glucose-fructose oxidoreductase
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
FFSP_072018_bottom_0_1um_scaffold_1310_13
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10206..10451)
DNA (246bp) protein (82aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003751182
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
FFSP_072018_bottom_0_1um_scaffold_1310_14
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10534..10761)
DNA (228bp) protein (76aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI0002E43CA4
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
FFSP_072018_bottom_0_1um_scaffold_1310_15
unknown

Not on your lists

comp(10797..11156)
DNA (360bp) protein (120aa)

This feature has no annotations

FFSP_072018_bottom_0_1um_scaffold_1310_16
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11206..11367)
DNA (162bp) protein (54aa)
Putative uncharacterized protein n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SGN2_THIDA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ98215.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
Displaying 16 items

View Taxonomy