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FFSP_072018_bottom_0_1um_scaffold_1426

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
FFSP_072018_bottom_0_1um_scaffold_1426_1
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31..1110)
DNA (1080bp) protein (360aa)
peptide chain release factor 1 n=1 Tax=Thiobacillus thioparus RepID=UPI000360C624
prfA; peptide chain release factor 1
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
FFSP_072018_bottom_0_1um_scaffold_1426_2
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1124..2377)
DNA (1254bp) protein (418aa)
hemA; glutamyl-tRNA reductase (EC:1.2.1.70)
glutamyl-tRNA reductase n=1 Tax=Thiobacillus thioparus RepID=UPI00037F1BED
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
FFSP_072018_bottom_0_1um_scaffold_1426_3
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2428..3345)
DNA (918bp) protein (306aa)
taurine catabolism dioxygenase n=1 Tax=Thiobacillus thioparus RepID=UPI00036767FB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ98444.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
FFSP_072018_bottom_0_1um_scaffold_1426_4
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3346..3966)
DNA (621bp) protein (207aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037A9A1A
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ98443.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
FFSP_072018_bottom_0_1um_scaffold_1426_5
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3993..4841)
DNA (849bp) protein (283aa)
3-mercaptopyruvate sulfurtransferase (EC:2.8.1.2)
3-mercaptopyruvate sulfurtransferase n=1 Tax=Thiobacillus denitrificans RepID=UPI00035FE0D3
Sulfurtransferase {ECO:0000256|RuleBase:RU000507}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
FFSP_072018_bottom_0_1um_scaffold_1426_6
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4937..5269)
DNA (333bp) protein (111aa)
sulfite reductase subunit gamma n=1 Tax=Thiobacillus thioparus RepID=UPI000368F575
sulfite reductase gamma chain
Putative sulfite reductase gamma chain {ECO:0000313|EMBL:AAZ98441.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
FFSP_072018_bottom_0_1um_scaffold_1426_7
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5325..5981)
DNA (657bp) protein (219aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037E6C65
hypothetical protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
FFSP_072018_bottom_0_1um_scaffold_1426_8
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5978..6199)
DNA (222bp) protein (74aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000376705A
hypothetical protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
FFSP_072018_bottom_0_1um_scaffold_1426_9
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6559..7863
DNA (1305bp) protein (435aa)
sulfite reductase, dissimilatory-type subunit alpha (EC:1.8.99.3)
Sulfite reductase, dissimilatory-type alpha subunit {ECO:0000313|EMBL:AAZ98438.1}; EC=1.8.99.3 {ECO:0000313|EMBL:AAZ98438.1};; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
Sulfite reductase, dissimilatory-type alpha subunit n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SG18_THIDA
FFSP_072018_bottom_0_1um_scaffold_1426_10
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7946..9016
DNA (1071bp) protein (357aa)
sulfite reductase, dissimilatory-type subunit beta (EC:1.8.99.3)
Sulfite reductase, dissimilatory-type beta subunit {ECO:0000313|EMBL:AAZ98437.1}; EC=1.8.99.3 {ECO:0000313|EMBL:AAZ98437.1};; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
Sulfite reductase, dissimilatory-type beta subunit n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SG19_THIDA
FFSP_072018_bottom_0_1um_scaffold_1426_11
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9332..9727
DNA (396bp) protein (132aa)
DsrF protein id=1364809 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
DsrF protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
FFSP_072018_bottom_0_1um_scaffold_1426_12
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9739..10038
DNA (300bp) protein (100aa)
sulfur relay protein TusB/DsrH n=1 Tax=Thiobacillus thioparus RepID=UPI00037B3DCC
DsrH protein
Tax=GWE1_Thiobacillus_62_9_curated
FFSP_072018_bottom_0_1um_scaffold_1426_13
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10062..10397
DNA (336bp) protein (112aa)
sulfur transfer protein TusE n=1 Tax=Thiobacillus thioparus RepID=UPI00037607FD
sulfite reductase
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
FFSP_072018_bottom_0_1um_scaffold_1426_14
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10552..11271
DNA (720bp) protein (240aa)
Putative DsrM protein id=1364806 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
DsrM protein
Tax=GWE1_Thiobacillus_62_9_curated
FFSP_072018_bottom_0_1um_scaffold_1426_15
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11322..12845
DNA (1524bp) protein (508aa)
Reductase, iron-sulfur binding subunit, putative id=1364805 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
reductase, iron-sulfur binding subunit
Tax=GWE1_Thiobacillus_62_9_curated
FFSP_072018_bottom_0_1um_scaffold_1426_16
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12908..14866
DNA (1959bp) protein (653aa)
glutamate synthase n=1 Tax=Thiobacillus denitrificans RepID=UPI00037195B3
glutamate synthase (NADPH) small subunit
Iron-sulfur cluster-binding protein, GltD family {ECO:0000313|EMBL:AAZ98430.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
FFSP_072018_bottom_0_1um_scaffold_1426_17
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14881..15366
DNA (486bp) protein (162aa)
Putative uncharacterized protein id=1344885 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
FFSP_072018_bottom_0_1um_scaffold_1426_18
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15363..16142
DNA (780bp) protein (260aa)
Iron-sulfur cluster protein id=1344884 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
iron-sulfur cluster protein
Tax=GWE1_Thiobacillus_62_9_curated
FFSP_072018_bottom_0_1um_scaffold_1426_19
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16149..16352
DNA (204bp) protein (68aa)
Molybdopterin oxidoreductase, membrane subunit id=1344883 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
molybdopterin oxidoreductase, membrane subunit
Tax=GWE1_Thiobacillus_62_9_curated
Displaying 19 items

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