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FFSP_072018_bottom_0_1um_scaffold_1456

Search features with annotation key words

Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
FFSP_072018_bottom_0_1um_scaffold_1456_1
unknown

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comp(3..113)
DNA (111bp) protein (37aa)

This feature has no annotations

FFSP_072018_bottom_0_1um_scaffold_1456_2
Aurantimonas manganoxydans, Aurantimonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(235..888)
DNA (654bp) protein (218aa)
Possible hydrogenase/urease accessory protein n=1 Tax=Manganese-oxidizing bacterium (strain SI85-9A1) RepID=Q1YJK1_MOBAS
Possible hydrogenase/urease accessory protein {ECO:0000313|EMBL:EAS50872.1}; TaxID=287752 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonadaceae; Aurantimonas.;" source="Manganese-oxidizing bacterium (strain SI85-9A1).;"
HupE/UreJ protein
FFSP_072018_bottom_0_1um_scaffold_1456_3
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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1182..2282
DNA (1101bp) protein (367aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000376F190
transcriptional regulator
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
FFSP_072018_bottom_0_1um_scaffold_1456_4
Rhodospirillaceae bacterium BRH_c57, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2343..2903)
DNA (561bp) protein (187aa)
hypothetical protein n=1 Tax=Thioalkalivibrio thiocyanodenitrificans RepID=UPI0003695080
TetR family transcriptional regulator {ECO:0000313|EMBL:KJS34380.1}; TaxID=1629718 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae.;" source="Rhodospirillaceae bacterium BRH_c57.;"
TetR family transcriptional regulator
FFSP_072018_bottom_0_1um_scaffold_1456_5
Methylobacterium sp. 4-46, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2907..3374)
DNA (468bp) protein (156aa)
50S ribosomal protein L21 n=1 Tax=Thioalkalivibrio thiocyanodenitrificans RepID=UPI00037B49FB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACA19354.1}; TaxID=426117 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium sp. (strain 4-46).;"
FFSP_072018_bottom_0_1um_scaffold_1456_6
Nitrosococcus watsonii, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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3625..4932
DNA (1308bp) protein (436aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000380E4D5
glcF; glycolate oxidase iron-sulfur subunit
Glycolate oxidase iron-sulfur subunit {ECO:0000256|PIRNR:PIRNR000139}; TaxID=105559 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus watsoni (strain C-113).;"
FFSP_072018_bottom_0_1um_scaffold_1456_7
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4922..5716
DNA (795bp) protein (265aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000380E4D5
hypothetical protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
FFSP_072018_bottom_0_1um_scaffold_1456_8
RBG_16_Gammaproteobacteria_62_13__curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5820..6701
DNA (882bp) protein (294aa)
hypothetical protein n=1 Tax=Thioalkalivibrio thiocyanodenitrificans RepID=UPI000367FAE0
putative phenazine biosynthesis protein
Tax=RBG_16_Gammaproteobacteria_62_13__curated
FFSP_072018_bottom_0_1um_scaffold_1456_9
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6827..8032
DNA (1206bp) protein (402aa)
GAF sensor signal transduction histidine kinase (EC:2.7.3.-)
histidine kinase n=1 Tax=Thiobacillus thioparus RepID=UPI00036E767F
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
FFSP_072018_bottom_0_1um_scaffold_1456_10
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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8078..8743
DNA (666bp) protein (222aa)
LuxR family transcriptional regulator n=1 Tax=Thiobacillus denitrificans RepID=UPI000376AAD5
LuxR family transcriptional regulator
Two Component Transcriptional Regulator, LuxR family {ECO:0000313|EMBL:AAZ98417.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
Displaying 10 items

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