ggKbase home page

FFSP_072018_mid_0_1um_scaffold_4414

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
FFSP_072018_mid_0_1um_scaffold_4414_1
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

3..203
DNA (201bp) protein (67aa)
SAM-dependent methyltransferase n=1 Tax=Segetibacter koreensis RepID=UPI00036170B8
RNA methylase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_072018_mid_0_1um_scaffold_4414_2
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(216..575)
DNA (360bp) protein (120aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037EB9CC
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_072018_mid_0_1um_scaffold_4414_3
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(684..1154)
DNA (471bp) protein (157aa)
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PR63_CHIPD
alkyl hydroperoxide reductase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_072018_mid_0_1um_scaffold_4414_4
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(1232..1618)
DNA (387bp) protein (129aa)
3-oxoacid CoA-transferase, B subunit n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PRC4_CHIPD
3-oxoacid CoA-transferase subunit B
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_072018_mid_0_1um_scaffold_4414_5
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(1638..1763)
DNA (126bp) protein (42aa)
3-oxoacid CoA-transferase, B subunit n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PRC4_CHIPD
3-oxoacid CoA-transferase subunit B
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_072018_mid_0_1um_scaffold_4414_6
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(1795..2487)
DNA (693bp) protein (231aa)
3-oxoacid CoA-transferase, A subunit n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PRC5_CHIPD
3-oxoacid CoA-transferase subunit A
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_072018_mid_0_1um_scaffold_4414_7
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(2487..2846)
DNA (360bp) protein (120aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003808869
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_072018_mid_0_1um_scaffold_4414_8
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(2843..3769)
DNA (927bp) protein (309aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037F8AC1
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_072018_mid_0_1um_scaffold_4414_9
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(3856..4200)
DNA (345bp) protein (115aa)
DNA-directed RNA polymerase subunit omega n=1 Tax=Segetibacter koreensis RepID=UPI000382E9B0
DNA-directed RNA polymerase subunit omega
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_072018_mid_0_1um_scaffold_4414_10
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(4224..4961)
DNA (738bp) protein (246aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00035E7F35
outer membrane assembly lipoprotein YfiO
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_072018_mid_0_1um_scaffold_4414_11
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists


comp(5105..5293)
DNA (189bp) protein (63aa)
30S ribosomal protein S1 n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TMD3_NIAKG
RNA binding S1 domain-containing protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
Displaying 11 items

View Taxonomy