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FFSP_09242018_shore_0_2um_scaffold_2716

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
FFSP_09242018_shore_0_2um_scaffold_2716_1
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(3..395)
DNA (393bp) protein (131aa)
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_09242018_shore_0_2um_scaffold_2716_2
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(423..1340)
DNA (918bp) protein (306aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000374CE3D
phosphate ABC transporter substrate-binding protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_09242018_shore_0_2um_scaffold_2716_3
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(1343..1576)
DNA (234bp) protein (78aa)
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_09242018_shore_0_2um_scaffold_2716_4
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists


1763..3130
DNA (1368bp) protein (456aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00035EB245
histidyl-tRNA synthetase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_09242018_shore_0_2um_scaffold_2716_5
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(3093..3488)
DNA (396bp) protein (132aa)
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_09242018_shore_0_2um_scaffold_2716_6
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(3503..4639)
DNA (1137bp) protein (379aa)
Acetyl-CoA acetyltransferase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PP06_CHIPD
acetyl-CoA acetyltransferase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_09242018_shore_0_2um_scaffold_2716_7
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

4682..5725
DNA (1044bp) protein (348aa)
Probable dual-specificity RNA methyltransferase RlmN n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TRT3_NIAKG
23S rRNA m(2)A-2503 methyltransferase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_09242018_shore_0_2um_scaffold_2716_8
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

5777..6922
DNA (1146bp) protein (382aa)
Pseudouridine synthase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TRT1_NIAKG
pseudouridine synthase Rsu
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_09242018_shore_0_2um_scaffold_2716_9
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

7006..7479
DNA (474bp) protein (158aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00035C1355
pseudouridine synthase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_09242018_shore_0_2um_scaffold_2716_10
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(7483..8550)
DNA (1068bp) protein (356aa)
amidohydrolase n=1 Tax=Spirosoma luteum RepID=UPI0003633F82
amidohydrolase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_09242018_shore_0_2um_scaffold_2716_11
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(8634..9158)
DNA (525bp) protein (175aa)
Peroxidase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PP02_CHIPD
peroxidase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_09242018_shore_0_2um_scaffold_2716_12
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(9217..10398)
DNA (1182bp) protein (394aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003754693
DNA polymerase IV
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_09242018_shore_0_2um_scaffold_2716_13
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

10477..11898
DNA (1422bp) protein (474aa)
Peptidase, S41 family n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W3F5_9FLAO
peptidase S41
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_09242018_shore_0_2um_scaffold_2716_14
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(11869..12342)
DNA (474bp) protein (158aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003604F01
16S rRNA processing protein RimM
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_09242018_shore_0_2um_scaffold_2716_15
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists


comp(12425..12886)
DNA (462bp) protein (154aa)
30S ribosomal protein S16 n=1 Tax=Segetibacter koreensis RepID=UPI0003720DEA
30S ribosomal protein S16
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_09242018_shore_0_2um_scaffold_2716_16
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists


comp(12952..13416)
DNA (465bp) protein (155aa)
signal recognition particle n=1 Tax=Segetibacter koreensis RepID=UPI000364F953
signal recognition particle protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
Displaying 16 items

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