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FFSP_09242018_shore_0_2um_scaffold_1540

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
FFSP_09242018_shore_0_2um_scaffold_1540_1
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists


111..2738
DNA (2628bp) protein (876aa)
Valine--tRNA ligase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PI83_CHIPD
valyl-tRNA synthetase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_09242018_shore_0_2um_scaffold_1540_2
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

2738..3238
DNA (501bp) protein (167aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037703A9
N-acetyltransferase GCN5
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_09242018_shore_0_2um_scaffold_1540_3
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(3239..4702)
DNA (1464bp) protein (488aa)
Uncharacterized protein n=1 Tax=Rhodonellum psychrophilum GCM71 = DSM 17998 RepID=U5BVG1_9BACT
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_09242018_shore_0_2um_scaffold_1540_4
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(4732..5229)
DNA (498bp) protein (166aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037BC515
AsnC family transcriptional regulator
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_09242018_shore_0_2um_scaffold_1540_5
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

5348..6643
DNA (1296bp) protein (432aa)
Adenosylhomocysteinase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TIZ6_NIAKG
adenosylhomocysteinase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_09242018_shore_0_2um_scaffold_1540_6
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

6795..8864
DNA (2070bp) protein (690aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000372EB4F
multi-sensor signal transduction histidine kinase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_09242018_shore_0_2um_scaffold_1540_7
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(8867..9097)
DNA (231bp) protein (77aa)
Uncharacterized protein n=1 Tax=Pseudoalteromonas spongiae UST010723-006 RepID=U1L1N9_9GAMM
GTP-binding protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_09242018_shore_0_2um_scaffold_1540_8
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

9148..10326
DNA (1179bp) protein (393aa)
Voltage-gated chloride channel family protein n=1 Tax=Flavobacterium cauense R2A-7 RepID=V6S812_9FLAO
Chloride channel protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_09242018_shore_0_2um_scaffold_1540_9
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

10328..10873
DNA (546bp) protein (182aa)
Acetyltransferase, ribosomal protein N-acetylase n=1 Tax=Flavobacterium limnosediminis JC2902 RepID=V6SRC8_9FLAO
acetyltransferase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_09242018_shore_0_2um_scaffold_1540_10
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

10880..11047
DNA (168bp) protein (56aa)
Uncharacterized protein n=1 Tax=Riemerella anatipestifer RA-CH-1 RepID=J9QX74_RIEAN
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_09242018_shore_0_2um_scaffold_1540_11
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

11113..11370
DNA (258bp) protein (86aa)
Uncharacterized protein n=1 Tax=Riemerella anatipestifer RA-CH-1 RepID=J9QX74_RIEAN
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_09242018_shore_0_2um_scaffold_1540_12
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

11380..13029
DNA (1650bp) protein (550aa)
Sodium-dependent phosphate transporter n=1 Tax=Flavobacterium frigoris PS1 RepID=H7FVH4_9FLAO
Na+/phosphate symporter
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_09242018_shore_0_2um_scaffold_1540_13
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(13080..14213)
DNA (1134bp) protein (378aa)
4-hydroxyphenylpyruvate dioxygenase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TPS2_NIAKG
4-hydroxyphenylpyruvate dioxygenase {ECO:0000313|EMBL:KIC89944.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
4-hydroxyphenylpyruvate dioxygenase
FFSP_09242018_shore_0_2um_scaffold_1540_14
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

14385..15506
DNA (1122bp) protein (374aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003707522
5-(carboxyamino)imidazole ribonucleotide synthase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_09242018_shore_0_2um_scaffold_1540_15
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(15503..16453)
DNA (951bp) protein (317aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TL92_NIAKG
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_09242018_shore_0_2um_scaffold_1540_16
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

16608..17891
DNA (1284bp) protein (428aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000380BADC
(dimethylallyl)adenosine tRNA methylthiotransferase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_09242018_shore_0_2um_scaffold_1540_17
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

17902..19191
DNA (1290bp) protein (430aa)
ATPase AAA n=1 Tax=Segetibacter koreensis RepID=UPI000371159F
transcriptional regulator
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_09242018_shore_0_2um_scaffold_1540_18
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

19196..19699
DNA (504bp) protein (168aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000379C438
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
Displaying 18 items

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