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FFSP_09242018_shore_0_2um_scaffold_152

Search features with annotation key words

Displaying items 1-30 of 39 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
FFSP_09242018_shore_0_2um_scaffold_152_1
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(2..2230)
DNA (2229bp) protein (743aa)
TonB-linked outer membrane protein, SusC/RagA family, partial n=1 Tax=Pedobacter agri RepID=UPI00029A7530
TonB-linked outer membrane protein, SusC/RagA family
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_09242018_shore_0_2um_scaffold_152_2
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(2439..3374)
DNA (936bp) protein (312aa)
epoxyqueuosine reductase n=1 Tax=Segetibacter koreensis RepID=UPI00037804C9
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_09242018_shore_0_2um_scaffold_152_3
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(3374..4423)
DNA (1050bp) protein (350aa)
Beta-lactamase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TFD9_NIAKG
beta-lactamase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_09242018_shore_0_2um_scaffold_152_4
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

4492..7086
DNA (2595bp) protein (865aa)
ATP-dependent chaperone ClpB n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TFE0_NIAKG
ATP-dependent chaperone ClpB
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_09242018_shore_0_2um_scaffold_152_5
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

7140..7805
DNA (666bp) protein (222aa)
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_09242018_shore_0_2um_scaffold_152_6
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

8015..8887
DNA (873bp) protein (291aa)
Uncharacterized protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PPC8_CHIPD
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_09242018_shore_0_2um_scaffold_152_7
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

8956..10014
DNA (1059bp) protein (353aa)
hypothetical protein n=1 Tax=Lewinella cohaerens RepID=UPI00035F07C0
saccharopine dehydrogenase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_09242018_shore_0_2um_scaffold_152_8
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

10063..11286
DNA (1224bp) protein (408aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000362E168
major facilitator superfamily (MFS) permease
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_09242018_shore_0_2um_scaffold_152_9
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(11344..12372)
DNA (1029bp) protein (343aa)
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_09242018_shore_0_2um_scaffold_152_10
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(12408..13958)
DNA (1551bp) protein (517aa)
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_09242018_shore_0_2um_scaffold_152_11
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(13958..14494)
DNA (537bp) protein (179aa)
hypothetical protein n=1 Tax=Lewinella cohaerens RepID=UPI0003807D40
ECF subfamily RNA polymerase sigma-24 subunit
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_09242018_shore_0_2um_scaffold_152_12
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(14632..15741)
DNA (1110bp) protein (370aa)
Carboxylate-amine ligase Niako_0394 n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TQQ8_NIAKG
Carboxylate-amine ligase ybdK
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_09242018_shore_0_2um_scaffold_152_13
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(15765..16718)
DNA (954bp) protein (318aa)
glutathione synthase n=1 Tax=Niabella aurantiaca RepID=UPI00037E5F48
glutathione synthase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_09242018_shore_0_2um_scaffold_152_14
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

16813..17652
DNA (840bp) protein (280aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037A5299
esterase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_09242018_shore_0_2um_scaffold_152_15
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(17705..20959)
DNA (3255bp) protein (1085aa)
OmpA-related protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NRW7_9SPHI
cell envelope biogenesis protein OmpA
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_09242018_shore_0_2um_scaffold_152_16
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(21182..24349)
DNA (3168bp) protein (1056aa)
Outer membrane receptor for ferrienterochelin and colicins id=4357469 bin=GWF2_Bacteroidetes_49_14 species=Flexibacter litoralis genus=Flexibacter taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_49_14 organism_group=Bacteroidetes organism_desc=Good (not ab)
outer membrane receptor for ferrienterochelin and colicins
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_09242018_shore_0_2um_scaffold_152_17
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

24391..25680
DNA (1290bp) protein (430aa)
3,4-dihydroxy-2-butanone 4-phosphate synthase n=1 Tax=Segetibacter koreensis RepID=UPI00037E28C7
GTP cyclohydrolase-2
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_09242018_shore_0_2um_scaffold_152_18
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(25683..26498)
DNA (816bp) protein (272aa)
Uncharacterized protein n=1 Tax=Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896) RepID=D2QRJ7_SPILD
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_09242018_shore_0_2um_scaffold_152_19
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(26596..27585)
DNA (990bp) protein (330aa)
phosphate starvation protein PhoH n=1 Tax=Segetibacter koreensis RepID=UPI00037A0AD1
PhoH family protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_09242018_shore_0_2um_scaffold_152_20
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(27734..28381)
DNA (648bp) protein (216aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003781596
ribulose-phosphate 3-epimerase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_09242018_shore_0_2um_scaffold_152_21
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

28518..29618
DNA (1101bp) protein (367aa)
WD40-like Beta Propeller Repeat family protein n=1 Tax=Bizionia argentinensis JUB59 RepID=G2EEF1_9FLAO
tolB; putative TolB protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_09242018_shore_0_2um_scaffold_152_22
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

29744..30217
DNA (474bp) protein (158aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TPD4_NIAKG
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_09242018_shore_0_2um_scaffold_152_23
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

30278..31435
DNA (1158bp) protein (386aa)
Homogentisate 12-dioxygenase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PUU7_CHIPD
homogentisate 12-dioxygenase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_09242018_shore_0_2um_scaffold_152_24
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

31475..31879
DNA (405bp) protein (135aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037DD0C4
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_09242018_shore_0_2um_scaffold_152_25
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

32116..32334
DNA (219bp) protein (73aa)
Translation initiation factor IF-1 n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PU93_CHIPD
translation initiation factor IF-1
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_09242018_shore_0_2um_scaffold_152_26
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists


32557..32937
DNA (381bp) protein (127aa)
30S ribosomal protein S13 n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PU95_CHIPD
30S ribosomal protein S13
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_09242018_shore_0_2um_scaffold_152_27
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists


33090..33500
DNA (411bp) protein (137aa)
30S ribosomal protein S11 n=1 Tax=Niabella aurantiaca RepID=UPI00036DE442
30S ribosomal protein S11
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_09242018_shore_0_2um_scaffold_152_28
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists


33644..34249
DNA (606bp) protein (202aa)
30S ribosomal protein S4 n=1 Tax=Niabella soli DSM 19437 RepID=H1NUG5_9SPHI
30S ribosomal protein S4
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_09242018_shore_0_2um_scaffold_152_29
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

34288..35289
DNA (1002bp) protein (334aa)
DNA-directed RNA polymerase subunit alpha n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TI98_NIAKG
DNA-directed RNA polymerase subunit alpha
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_09242018_shore_0_2um_scaffold_152_30
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists


35370..35882
DNA (513bp) protein (171aa)
50S ribosomal protein L17 n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TI97_NIAKG
50S ribosomal protein L17P
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
Displaying items 1-30 of 39 in total

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