ggKbase home page

FFSP_09242018_shore_0_2um_scaffold_1051

Search features with annotation key words

Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
FFSP_09242018_shore_0_2um_scaffold_1051_1
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

73..597
DNA (525bp) protein (175aa)
FGGY family sugar kinase id=12495564 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
FGGY family sugar kinase
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
FFSP_09242018_shore_0_2um_scaffold_1051_2
Achromobacter sp. RTa, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

747..2603
DNA (1857bp) protein (619aa)
Uncharacterized protein n=1 Tax=Achromobacter xylosoxidans (strain A8) RepID=E3HRW6_ACHXA
Uncharacterized protein {ECO:0000313|EMBL:KGE00038.1}; TaxID=1532557 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter sp. RTa.;"
hypothetical protein
FFSP_09242018_shore_0_2um_scaffold_1051_3
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2615..3004)
DNA (390bp) protein (130aa)
hypothetical protein id=12495563 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
FFSP_09242018_shore_0_2um_scaffold_1051_4
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2997..3890)
DNA (894bp) protein (298aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000363BA38
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
FFSP_09242018_shore_0_2um_scaffold_1051_5
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3939..5135
DNA (1197bp) protein (399aa)
succinyldiaminopimelate transaminase (EC:2.6.1.11); K14267 N-succinyldiaminopimelate aminotransferase [EC:2.6.1.17] id=12495561 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
succinyldiaminopimelate transaminase (EC:2.6.1.11)
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
FFSP_09242018_shore_0_2um_scaffold_1051_6
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5186..6010
DNA (825bp) protein (275aa)
dapD; 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase (EC:2.3.1.117); K00674 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase [EC:2.3.1.117] id=12495560 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
dapD; 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase (EC:2.3.1.117)
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
FFSP_09242018_shore_0_2um_scaffold_1051_7
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6060..6842
DNA (783bp) protein (261aa)
peptidase M48 Ste24p n=1 Tax=Thiobacillus denitrificans RepID=UPI00036D16D2
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
FFSP_09242018_shore_0_2um_scaffold_1051_8
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6839..7180
DNA (342bp) protein (114aa)
membrane protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00036BCF46
transmembrane protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
FFSP_09242018_shore_0_2um_scaffold_1051_9
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7317..7706
DNA (390bp) protein (130aa)
Uncharacterized protein n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AGP8_9PROT
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
FFSP_09242018_shore_0_2um_scaffold_1051_10
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7789..8826)
DNA (1038bp) protein (346aa)
diguanylate cyclase/phosphodiesterase id=12495183 bin=THIO_HI species=unknown genus=Methylotenera taxon_order=Methylophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
diguanylate cyclase/phosphodiesterase
Tax=GWE1_Thiobacillus_62_9_curated
Displaying 10 items

View Taxonomy