ggKbase home page

FFSP_09242018_shore_0_2um_scaffold_1229

Search features with annotation key words

Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
FFSP_09242018_shore_0_2um_scaffold_1229_1
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(44..1219)
DNA (1176bp) protein (392aa)
D-3-phosphoglycerate dehydrogenase (EC:1.1.1.95)
3-phosphoglycerate dehydrogenase n=1 Tax=Thiobacillus thioparus RepID=UPI00036CE5FD
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
FFSP_09242018_shore_0_2um_scaffold_1229_2
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1225..2304)
DNA (1080bp) protein (360aa)
phosphoserine aminotransferase (EC:2.6.1.52); K00831 phosphoserine aminotransferase [EC:2.6.1.52] id=12497453 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
phosphoserine aminotransferase (EC:2.6.1.52)
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
FFSP_09242018_shore_0_2um_scaffold_1229_3
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(2301..4859)
DNA (2559bp) protein (853aa)
DNA gyrase subunit A (EC:5.99.1.3)
DNA gyrase subunit A {ECO:0000256|HAMAP-Rule:MF_01897}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01897};; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
DNA gyrase subunit A n=1 Tax=Thiobacillus thioparus RepID=UPI00037C9D65
FFSP_09242018_shore_0_2um_scaffold_1229_4
Sulfuritalea hydrogenivorans, Sulfuritalea, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4932..5348)
DNA (417bp) protein (139aa)
biopolymer transporter ExbD n=1 Tax=Thiobacillus denitrificans RepID=UPI00037A4F7A
biopolymer transport protein ExbD/TolR
Biopolymer transport protein ExbD/TolR {ECO:0000313|EMBL:BAO30327.1}; TaxID=1223802 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Sulfuritalea.;" source="Sulfuritalea hydrogenivorans sk43H.;"
FFSP_09242018_shore_0_2um_scaffold_1229_5
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5352..6077)
DNA (726bp) protein (242aa)
flagellar motor protein MotA n=1 Tax=Thiobacillus thioparus RepID=UPI00037A2A8B
MotA/TolQ/ExbB proton channel family protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
FFSP_09242018_shore_0_2um_scaffold_1229_6
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6088..6750)
DNA (663bp) protein (221aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00036FD9E5
TonB protein
TonB protein {ECO:0000313|EMBL:AAZ96863.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
FFSP_09242018_shore_0_2um_scaffold_1229_7
Janthinobacterium lividum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6758..7498)
DNA (741bp) protein (247aa)
outer membrane receptor protein n=1 Tax=Janthinobacterium lividum RepID=UPI000289E695
Outer membrane receptor protein {ECO:0000313|EMBL:KHA78765.1}; TaxID=29581 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium lividum.;"
outer membrane receptor protein
Displaying 7 items

View Taxonomy