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FFSP_09242018_shore_0_2um_scaffold_1415

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
FFSP_09242018_shore_0_2um_scaffold_1415_1
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..912)
DNA (912bp) protein (304aa)
glutaminyl-tRNA synthetase (EC:6.1.1.18)
Glutamine--tRNA ligase id=1324816 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
FFSP_09242018_shore_0_2um_scaffold_1415_2
R_Betaproteobacteria_64_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(956..1282)
DNA (327bp) protein (109aa)
putative plasmid stabilization system protein id=12495378 bin=THIO_HI species=Variovorax paradoxus genus=Variovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
addiction module toxin, RelE/StbE family
Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
FFSP_09242018_shore_0_2um_scaffold_1415_3
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(1291..1554)
DNA (264bp) protein (88aa)
Prevent-host-death family protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8P9K8_9BACT
prevent-host-death family protein
Prevent-host-death family protein {ECO:0000313|EMBL:CBK39917.1}; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
FFSP_09242018_shore_0_2um_scaffold_1415_4
unknown

Not on your lists

comp(1615..2751)
DNA (1137bp) protein (379aa)

This feature has no annotations

FFSP_09242018_shore_0_2um_scaffold_1415_5
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2789..3865)
DNA (1077bp) protein (359aa)
tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC:2.1.1.61)
tRNA-specific 2-thiouridylase MnmA id=1324815 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
FFSP_09242018_shore_0_2um_scaffold_1415_6
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3862..4326)
DNA (465bp) protein (155aa)
Putative hydrolase id=1324814 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hydrolase
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
FFSP_09242018_shore_0_2um_scaffold_1415_7
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4319..4861)
DNA (543bp) protein (181aa)
ribosomal large subunit pseudouridine synthase E (EC:5.4.99.-)
ribosomal large subunit pseudouridine synthase E n=1 Tax=Thiobacillus denitrificans RepID=UPI00035E3238
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
FFSP_09242018_shore_0_2um_scaffold_1415_8
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4921..6168
DNA (1248bp) protein (416aa)
isocitrate dehydrogenase (NADP) (EC:1.1.1.42); K00031 isocitrate dehydrogenase [EC:1.1.1.42] id=12497012 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
isocitrate dehydrogenase (NADP) (EC:1.1.1.42)
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
FFSP_09242018_shore_0_2um_scaffold_1415_9
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6248..6475
DNA (228bp) protein (76aa)
Putative uncharacterized protein id=1324810 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
Displaying 9 items

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