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FFSP_09242018_shore_0_2um_scaffold_640

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
FFSP_09242018_shore_0_2um_scaffold_640_1
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..250)
DNA (249bp) protein (83aa)
RIO1 family serine kinase n=1 Tax=Thiobacillus denitrificans RepID=UPI000368A084
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
FFSP_09242018_shore_0_2um_scaffold_640_2
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(250..1650)
DNA (1401bp) protein (467aa)
aspA; aspartate ammonia-lyase (EC:4.2.1.2)
Aspartate ammonia-lyase id=1368050 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
FFSP_09242018_shore_0_2um_scaffold_640_3
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1697..2155
DNA (459bp) protein (153aa)
thioredoxin n=1 Tax=Thiobacillus denitrificans RepID=UPI000361117E
thioredoxin
Tax=GWE1_Thiobacillus_62_9_curated
FFSP_09242018_shore_0_2um_scaffold_640_4
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2186..2692
DNA (507bp) protein (169aa)
hypothetical protein id=12496694 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
hypothetical protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
FFSP_09242018_shore_0_2um_scaffold_640_5
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2692..3960
DNA (1269bp) protein (423aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003611F65
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
FFSP_09242018_shore_0_2um_scaffold_640_6
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3957..4475
DNA (519bp) protein (173aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000371B04B
RND multidrug efflux membrane fusion protein MexE
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
FFSP_09242018_shore_0_2um_scaffold_640_7
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4588..4725)
DNA (138bp) protein (46aa)
Uncharacterized protein n=1 Tax=Cupriavidus necator (strain ATCC 43291 / DSM 13513 / N-1) RepID=F8GN72_CUPNN
hypothetical protein
Tax=CG_Rhodof_02
FFSP_09242018_shore_0_2um_scaffold_640_8
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4989..5957)
DNA (969bp) protein (323aa)
Uncharacterized protein n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AFA1_9PROT
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
FFSP_09242018_shore_0_2um_scaffold_640_9
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6098..7027)
DNA (930bp) protein (310aa)
Putative signal peptide protein id=1312411 bin=GWE1_T_denit_62_9 species=Albidiferax ferrireducens genus=Albidiferax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
putative signal peptide protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
FFSP_09242018_shore_0_2um_scaffold_640_10
RBG_16_Gallionellales_57_15_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7052..7264)
DNA (213bp) protein (71aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037906C3
hypothetical protein
Tax=RBG_16_Gallionellales_57_15_curated
FFSP_09242018_shore_0_2um_scaffold_640_11
Rhodoferax ferrireducens, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7677..8996)
DNA (1320bp) protein (440aa)
Sodium/hydrogen exchanger n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21YM3_RHOFD
sodium/hydrogen exchanger
Sodium/hydrogen exchanger {ECO:0000313|EMBL:ABD69130.1}; TaxID=338969 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Rhodoferax.;" source="Rhodoferax ferrireducens (strain ATCC BAA-621 / DSM 15236 / T118); (Albidiferax ferrireducens).;"
FFSP_09242018_shore_0_2um_scaffold_640_12
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9279..13994)
DNA (4716bp) protein (1572aa)
Cyclic beta 1-2 glucan synthetase id=1312413 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
cyclic beta 1-2 glucan synthetase
Tax=GWE1_Thiobacillus_62_9_curated
Displaying 12 items

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