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FFSP_09252017_12_scaffold_1541

Search features with annotation key words

Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
FFSP_09252017_12_scaffold_1541_1
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

35..2008
DNA (1974bp) protein (658aa)
succinate dehydrogenase n=1 Tax=Segetibacter koreensis RepID=UPI0003614453
succinate dehydrogenase or fumarate reductase, flavoprotein subunit
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_09252017_12_scaffold_1541_2
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

2065..2814
DNA (750bp) protein (250aa)
succinate dehydrogenase n=1 Tax=Segetibacter koreensis RepID=UPI00036B7B2B
succinate dehydrogenase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_09252017_12_scaffold_1541_3
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(2904..3713)
DNA (810bp) protein (270aa)
hypothetical protein n=1 Tax=Pedobacter arcticus RepID=UPI0003617445
PAS domain-containing protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_09252017_12_scaffold_1541_4
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

3764..5956
DNA (2193bp) protein (731aa)
protease n=1 Tax=Pedobacter agri RepID=UPI00029AEB56
oligopeptidase B
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_09252017_12_scaffold_1541_5
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

5967..6686
DNA (720bp) protein (240aa)
tRNA1(Val) (adenine(37)-N6)-methyltransferase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PS46_CHIPD
methyltransferase small
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_09252017_12_scaffold_1541_6
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

6729..7127
DNA (399bp) protein (133aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000361F330
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_09252017_12_scaffold_1541_7
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

7146..7697
DNA (552bp) protein (184aa)
Inorganic pyrophosphatase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T9N8_NIAKG
inorganic pyrophosphatase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_09252017_12_scaffold_1541_8
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

7699..8124
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=Flavobacteria bacterium (strain BBFL7) RepID=Q26BZ0_FLABB
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_09252017_12_scaffold_1541_9
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(8332..9114)
DNA (783bp) protein (261aa)
NLP/P60 protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T9P0_NIAKG
NLP/P60 protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_09252017_12_scaffold_1541_10
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

9186..9749
DNA (564bp) protein (188aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T9P2_NIAKG
ECF subfamily RNA polymerase sigma-24 subunit
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_09252017_12_scaffold_1541_11
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

9749..10099
DNA (351bp) protein (117aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003638454
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_09252017_12_scaffold_1541_12
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(10096..10596)
DNA (501bp) protein (167aa)
Uncharacterized protein n=1 Tax=Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15) RepID=I2EUX4_EMTOG
protein of unknown function DUF985
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_09252017_12_scaffold_1541_13
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(10653..13922)
DNA (3270bp) protein (1090aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00035F3435
beta-galactosidase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_09252017_12_scaffold_1541_14
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

14251..15618
DNA (1368bp) protein (456aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036A75BF
ammonium transporter
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_09252017_12_scaffold_1541_15
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

15840..16658
DNA (819bp) protein (273aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037D88E4
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_09252017_12_scaffold_1541_16
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

16758..17777
DNA (1020bp) protein (340aa)
Uncharacterized protein n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8EPE6_RUNSL
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_09252017_12_scaffold_1541_17
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(17798..18256)
DNA (459bp) protein (153aa)
hypothetical protein n=1 Tax=Rudanella lutea RepID=UPI0003745C7F
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_09252017_12_scaffold_1541_18
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(18757..20004)
DNA (1248bp) protein (416aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000376960C
peptidase M50
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_09252017_12_scaffold_1541_19
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(20037..21194)
DNA (1158bp) protein (386aa)
1-deoxy-D-xylulose 5-phosphate reductoisomerase n=1 Tax=Segetibacter koreensis RepID=UPI000367CA70
1-deoxy-D-xylulose 5-phosphate reductoisomerase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_09252017_12_scaffold_1541_20
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(21257..22696)
DNA (1440bp) protein (480aa)
GH3 auxin-responsive promoter n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T919_NIAKG
GH3 auxin-responsive promoter
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_09252017_12_scaffold_1541_21
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists


22912..23217
DNA (306bp) protein (102aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000362D1FD
50S ribosomal protein L21
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_09252017_12_scaffold_1541_22
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists


23266..23532
DNA (267bp) protein (89aa)
50S ribosomal protein L27 n=1 Tax=Segetibacter koreensis RepID=UPI0003636766
50S ribosomal protein L27
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_09252017_12_scaffold_1541_23
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

23607..23843
DNA (237bp) protein (79aa)
DNA-binding protein HU, putative n=1 Tax=marine gamma proteobacterium HTCC2143 RepID=A0YDQ9_9GAMM
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_09252017_12_scaffold_1541_24
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

23979..25514
DNA (1536bp) protein (512aa)
PHP domain protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T913_NIAKG
PHP domain-containing protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_09252017_12_scaffold_1541_25
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(25511..29080)
DNA (3570bp) protein (1190aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000375CF62
integral membrane sensor signal transduction histidine kinase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_09252017_12_scaffold_1541_26
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(29248..29826)
DNA (579bp) protein (193aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037BA740
MazG family protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_09252017_12_scaffold_1541_27
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(29831..30658)
DNA (828bp) protein (276aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003825E2D
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_09252017_12_scaffold_1541_28
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

30742..31572
DNA (831bp) protein (277aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000364480E
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_09252017_12_scaffold_1541_29
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

31559..32629
DNA (1071bp) protein (357aa)
Oxidoreductase domain protein id=4527372 bin=GWA2_Flavobacterium_35_26 species=Flavobacterium johnsoniae genus=Flavobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWA2_Flavobacterium_35_26 organism_group=Bacteroidetes organism_desc=Good+ six scaffolds
oxidoreductase domain-containing protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_09252017_12_scaffold_1541_30
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(32626..34488)
DNA (1863bp) protein (621aa)
Glutathione-regulated potassium-efflux system protein KefC n=1 Tax=Smithella sp. ME-1 RepID=V4FBC0_9DELT
kefB; potassium efflux system protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
Displaying items 1-30 of 34 in total

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