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FFSP_09252017_12_scaffold_1841

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
FFSP_09252017_12_scaffold_1841_1
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

87..923
DNA (837bp) protein (279aa)
Elongation factor Ts n=1 Tax=Niabella soli DSM 19437 RepID=H1NQU8_9SPHI
elongation factor Ts
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_09252017_12_scaffold_1841_2
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

1016..1732
DNA (717bp) protein (239aa)
Uridylate kinase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T7K0_NIAKG
uridylate kinase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_09252017_12_scaffold_1841_3
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

1790..3094
DNA (1305bp) protein (435aa)
Outer membrane efflux protein n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8EHA9_RUNSL
outer membrane efflux protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_09252017_12_scaffold_1841_4
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

3105..4253
DNA (1149bp) protein (383aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037B42A1
2-keto-4-methylthiobutyrate aminotransferase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_09252017_12_scaffold_1841_5

Not on your lists

comp(4266..4589)
DNA (324bp) protein (108aa)
mRNA interferase n=1 Tax=Marivirga tractuosa (strain ATCC 23168 / DSM 4126 / NBRC 15989 / NCIMB 1408 / VKM B-1430 / H-43) RepID=E4TRL9_MARTH
Marine sediment metagenome DNA, contig: S01H4_C01330 {ECO:0000313|EMBL:GAG66901.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
growth inhibitor PemK
FFSP_09252017_12_scaffold_1841_6
Flavobacterium sp. EM1308, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(4580..4825)
DNA (246bp) protein (82aa)
Prevent host death protein, Phd antitoxin {ECO:0000313|EMBL:KFC58760.1}; TaxID=1492737 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1308.;"
Transcriptional regulator/antitoxin, MazE id=4224153 bin=GWF2_Bacteroidetes_33_38 species=Fulvivirga imtechensis genus=Fulvivirga taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_33_38 organism_group=Bacteroidetes organism_desc=a699
MazF family transcriptional regulator
FFSP_09252017_12_scaffold_1841_7
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

5006..5380
DNA (375bp) protein (125aa)
Putative uncharacterized protein n=1 Tax=Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469) RepID=Q11NK3_CYTH3
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_09252017_12_scaffold_1841_8
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

5382..6056
DNA (675bp) protein (225aa)
Two component transcriptional regulator, LuxR family n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PMV2_CHIPD
LuxR family transcriptional regulator
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_09252017_12_scaffold_1841_9
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(6057..6848)
DNA (792bp) protein (264aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TNV0_NIAKG
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_09252017_12_scaffold_1841_10
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(6852..10412)
DNA (3561bp) protein (1187aa)
Acriflavin resistance protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TNV2_NIAKG
acriflavin resistance protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_09252017_12_scaffold_1841_11
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(10425..11630)
DNA (1206bp) protein (402aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00035D50DD
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_09252017_12_scaffold_1841_12
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(11650..13050)
DNA (1401bp) protein (467aa)
Outer membrane efflux protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TNV4_NIAKG
outer membrane efflux protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_09252017_12_scaffold_1841_13
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(13056..13595)
DNA (540bp) protein (180aa)
Transcriptional regulator, TetR family n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TNV5_NIAKG
TetR family transcriptional regulator
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_09252017_12_scaffold_1841_14
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

13699..14322
DNA (624bp) protein (208aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000374D38B
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_09252017_12_scaffold_1841_15
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

14349..15482
DNA (1134bp) protein (378aa)
A-glycosyltransferase n=1 Tax=Saprospira grandis (strain Lewin) RepID=H6KZC2_SAPGL
a-glycosyltransferase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_09252017_12_scaffold_1841_16
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

15508..15852
DNA (345bp) protein (115aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036B4C7D
gliding motility protein GldC
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_09252017_12_scaffold_1841_17
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

15915..16190
DNA (276bp) protein (92aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8THG4_NIAKG
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_09252017_12_scaffold_1841_18
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

16196..16732
DNA (537bp) protein (179aa)
Colicin V production protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8THG5_NIAKG
colicin V production protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_09252017_12_scaffold_1841_19
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

16840..17508
DNA (669bp) protein (223aa)
alpha/beta hydrolase n=1 Tax=Segetibacter koreensis RepID=UPI0003716B6F
alpha/beta hydrolase fold protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_09252017_12_scaffold_1841_20
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

17551..18090
DNA (540bp) protein (180aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037789C3
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_09252017_12_scaffold_1841_21
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

18150..19028
DNA (879bp) protein (293aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00035EC60C
inorganic polyphosphate/ATP-NAD kinase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_09252017_12_scaffold_1841_22
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

19088..19936
DNA (849bp) protein (283aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003726DFF
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_09252017_12_scaffold_1841_23
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

20013..20783
DNA (771bp) protein (257aa)
UDP pyrophosphate synthase n=1 Tax=Segetibacter koreensis RepID=UPI0003750843
undecaprenyl pyrophosphate synthase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
Displaying 23 items

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