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FFSP_09252017_12_scaffold_3117

Search features with annotation key words

Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
FFSP_09252017_12_scaffold_3117_1
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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3..659
DNA (657bp) protein (219aa)
Integrase catalytic region n=1 Tax=Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896) RepID=D2QV88_SPILD
Integrase catalytic region
Integrase catalytic region {ECO:0000313|EMBL:ADB42720.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
FFSP_09252017_12_scaffold_3117_2
Flavobacterium branchiophilum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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686..913
DNA (228bp) protein (76aa)
hypothetical protein n=1 Tax=Cytophaga aurantiaca RepID=UPI0003767DE2
glyoxalase
Glyoxalase family protein {ECO:0000313|EMBL:CCB69521.1}; TaxID=1034807 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium branchiophilum (strain FL-15).;"
FFSP_09252017_12_scaffold_3117_3
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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1403..1597
DNA (195bp) protein (65aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TJZ9_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW02937.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
FFSP_09252017_12_scaffold_3117_4
Pedobacter glucosidilyticus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(1627..3048)
DNA (1422bp) protein (474aa)
RND efflux system, outer membrane lipoprotein, NodT family n=1 Tax=Cyclobacterium qasimii M12-11B RepID=S7VPS1_9BACT
Toluene efflux pump outer membrane protein TtgI {ECO:0000313|EMBL:KHJ36714.1}; TaxID=1122941 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter glucosidilyticus.;"
NodT family RND efflux system outer membrane lipoprotein
FFSP_09252017_12_scaffold_3117_5
Pedobacter glucosidilyticus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(3032..6265)
DNA (3234bp) protein (1078aa)
RND efflux system, inner membrane transporter CmeB n=1 Tax=Cyclobacterium qasimii M12-11B RepID=S7VN09_9BACT
Efflux pump membrane transporter BepE {ECO:0000313|EMBL:KHJ36713.1}; TaxID=1122941 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter glucosidilyticus.;"
hydrophobe/amphiphile efflux-1 (HAE1) family transporter
FFSP_09252017_12_scaffold_3117_6
Pedobacter glucosidilyticus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(6292..7377)
DNA (1086bp) protein (362aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4L5A6_HALH1
Efflux pump periplasmic linker BepD {ECO:0000313|EMBL:KHJ36712.1}; TaxID=1122941 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter glucosidilyticus.;"
RND family efflux transporter MFP subunit
FFSP_09252017_12_scaffold_3117_7
unknown

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comp(7484..7921)
DNA (438bp) protein (146aa)

This feature has no annotations

FFSP_09252017_12_scaffold_3117_8
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

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comp(8054..8476)
DNA (423bp) protein (141aa)
type I citrate synthase n=1 Tax=Segetibacter koreensis RepID=UPI00037C492C
citrate (Si)-synthase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
Displaying 8 items

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