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FFSP_09252017_12_scaffold_567

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
FFSP_09252017_12_scaffold_567_1
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(3..881)
DNA (879bp) protein (293aa)
Extradiol ring-cleavage dioxygenase class III protein subunit B n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PI17_CHIPD
extradiol ring-cleavage dioxygenase class III protein subunit B
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_09252017_12_scaffold_567_2
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(860..1771)
DNA (912bp) protein (304aa)
dithiol-disulfide isomerase n=1 Tax=Pontibacter roseus RepID=UPI00037CDC9D
DSBA oxidoreductase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_09252017_12_scaffold_567_3
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(1880..2458)
DNA (579bp) protein (193aa)
cyclic nucleotide-binding protein n=1 Tax=Pontibacter roseus RepID=UPI0003626475
cyclic nucleotide-binding protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_09252017_12_scaffold_567_4
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

3154..3903
DNA (750bp) protein (250aa)
Uncharacterized protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IGT4_FLUTR
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_09252017_12_scaffold_567_5
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(4418..4843)
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0SEA4_PEDSD
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_09252017_12_scaffold_567_6
Bacteroides fragilis CAG:558, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6277..7704)
DNA (1428bp) protein (476aa)
Type III restriction-modification system Res subunit n=1 Tax=Bacteroides fragilis CAG:558 RepID=R5RG28_9BACE
Type III restriction-modification system Res subunit {ECO:0000313|EMBL:CCZ39493.1}; TaxID=1263047 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides fragilis CAG:558.;"
DNA/RNA helicase
FFSP_09252017_12_scaffold_567_7
Chryseobacterium sp. StRB126, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(7730..8752)
DNA (1023bp) protein (341aa)
Uncharacterized protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W5K5_9FLAO
uncharacterized protein
Uncharacterized protein {ECO:0000313|EMBL:BAP31915.1}; TaxID=878220 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium sp. StRB126.;"
FFSP_09252017_12_scaffold_567_8
Cellulophaga lytica, Cellulophaga, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(8810..10261)
DNA (1452bp) protein (484aa)
Uncharacterized protein n=1 Tax=Cellulophaga lytica (strain ATCC 23178 / DSM 7489 / JCM 8516 / NBRC 14961 / NCIMB 1423 / VKM B-1433 / Cy l20) RepID=F0RFT7_CELLC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADY30062.1}; TaxID=867900 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Cellulophaga.;" source="Cellulophaga lytica (strain ATCC 23178 / DSM 7489 / JCM 8516 / NBRC; 14961 / NCIMB 1423 / VKM B-1433 / Cy l20).;"
FFSP_09252017_12_scaffold_567_9
Flexibacter litoralis, Flexibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(10254..13760)
DNA (3507bp) protein (1169aa)
DNA/RNA helicase, superfamily I n=1 Tax=Flexibacter litoralis (strain ATCC 23117 / DSM 6794 / NBRC 15988 / NCIMB 1366 / Sio-4) RepID=I4AFP7_FLELS
DNA/RNA helicase
DNA/RNA helicase, superfamily I {ECO:0000313|EMBL:AFM02782.1}; TaxID=880071 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Flexibacter.;" source="Flexibacter litoralis (strain ATCC 23117 / DSM 6794 / NBRC 15988 /; NCIMB 1366 / Sio-4).;"
FFSP_09252017_12_scaffold_567_10
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(13797..15875)
DNA (2079bp) protein (693aa)
Stem cell self-renewal protein Piwi n=1 Tax=Cyclobacterium marinum (strain ATCC 25205 / DSM 745) RepID=G0IWK9_CYCMS
stem cell self-renewal protein Piwi
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_09252017_12_scaffold_567_11
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15876..16904)
DNA (1029bp) protein (343aa)
Putative uncharacterized protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T5U8_PALPW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADQ80092.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
FFSP_09252017_12_scaffold_567_12
GWF2_Bacteroidetes_33_38_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16930..19947)
DNA (3018bp) protein (1006aa)
Helicase, type I site-specific restriction-modification system restriction subunit id=3735046 bin=GWF2_Bacteroidetes_33_38 species=Belliella baltica genus=Belliella taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_33_38 organism_group=Bacteroidetes organism_desc=a699
helicase, type I site-specific restriction-modification system restriction subunit
Tax=GWF2_Bacteroidetes_33_38_curated
FFSP_09252017_12_scaffold_567_13
Candidatus Competibacter denitrificans, Candidatus Competibacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19951..22698)
DNA (2748bp) protein (916aa)
Putative uncharacterized protein n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XW02_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDI03003.1}; TaxID=1400863 species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Competibacter.;" source="Candidatus Competibacter denitrificans Run_A_D11.;"
type III restriction protein res subunit
FFSP_09252017_12_scaffold_567_14
GWF2_TM6_33_332, TM6, Bacteria

Not on your lists

comp(22699..24003)
DNA (1305bp) protein (435aa)
Restriction endonuclease S subunit n=1 Tax=Flexibacter litoralis (strain ATCC 23117 / DSM 6794 / NBRC 15988 / NCIMB 1366 / Sio-4) RepID=I4AFD7_FLELS
Restriction endonuclease S subunit {ECO:0000313|EMBL:KKP51662.1}; TaxID=1619080 species="Bacteria; candidate division TM6.;" source="candidate division TM6 bacterium GW2011_GWF2_33_332.;"
restriction endonuclease S subunit
FFSP_09252017_12_scaffold_567_15
Tumebacillus flagellatus, Tumebacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(24009..24761)
DNA (753bp) protein (251aa)
hypothetical protein n=1 Tax=Synechococcus sp. PCC 7336 RepID=UPI00034B52B3
Uncharacterized protein {ECO:0000313|EMBL:KEO83534.1}; TaxID=1157490 species="Bacteria; Firmicutes; Bacilli; Bacillales; Alicyclobacillaceae; Tumebacillus.;" source="Tumebacillus flagellatus.;"
FFSP_09252017_12_scaffold_567_16
Mucinivorans hirudinis, Mucinivorans, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24761..26080)
DNA (1320bp) protein (440aa)
Conserved domain protein n=1 Tax=Bacteroides fluxus YIT 12057 RepID=F3PYW2_9BACE
ATP binding protein
ATP binding protein {ECO:0000313|EMBL:CDN31538.1}; TaxID=1433126 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Mucinivorans.;" source="Mucinivorans hirudinis.;"
FFSP_09252017_12_scaffold_567_17
GWF2_Bacteroidetes_33_38_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26082..27866)
DNA (1785bp) protein (595aa)
Type I restriction-modification system methyltransferase subunit id=3735052 bin=GWF2_Bacteroidetes_33_38 species=Belliella baltica genus=Belliella taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_33_38 organism_group=Bacteroidetes organism_desc=a699
type I restriction-modification system methyltransferase subunit
Tax=GWF2_Bacteroidetes_33_38_curated
FFSP_09252017_12_scaffold_567_18
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(27870..28181)
DNA (312bp) protein (104aa)
Helix-turn-helix protein n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KU49_SOLCM
Helix-turn-helix protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_09252017_12_scaffold_567_19
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(28344..30593)
DNA (2250bp) protein (750aa)
VirE protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IGJ3_FLUTR
VirE protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_09252017_12_scaffold_567_20
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(30624..30929)
DNA (306bp) protein (102aa)
DNA binding domain protein, excisionase family id=4339294 bin=GWA2_Bacteroidetes_40_14 species=Cellulophaga lytica genus=Cellulophaga taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWA2_Bacteroidetes_40_14 organism_group=Bacteroidetes organism_desc=Good
DNA-binding domain-containing protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_09252017_12_scaffold_567_21
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(31035..32102)
DNA (1068bp) protein (356aa)
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_09252017_12_scaffold_567_22
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(32105..33211)
DNA (1107bp) protein (369aa)
Integrase family protein n=1 Tax=Cellulophaga lytica (strain ATCC 23178 / DSM 7489 / JCM 8516 / NBRC 14961 / NCIMB 1423 / VKM B-1433 / Cy l20) RepID=F0REL0_CELLC
recombinase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_09252017_12_scaffold_567_23
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(33208..33654)
DNA (447bp) protein (149aa)
DNA binding domain protein, excisionase family n=1 Tax=Cellulophaga lytica (strain ATCC 23178 / DSM 7489 / JCM 8516 / NBRC 14961 / NCIMB 1423 / VKM B-1433 / Cy l20) RepID=F0REK9_CELLC
DNA-binding protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_09252017_12_scaffold_567_24
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(33776..34429)
DNA (654bp) protein (218aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037AE2DF
tRNA modification GTPase trmE
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_09252017_12_scaffold_567_25
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(34426..35121)
DNA (696bp) protein (232aa)
tRNA modification GTPase MnmE n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TRX1_NIAKG
tRNA modification GTPase trmE
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_09252017_12_scaffold_567_26
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(35151..35684)
DNA (534bp) protein (178aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037202C1
TonB family protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
Displaying 26 items

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