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FFSP_09252017_12_scaffold_2588

Search features with annotation key words

Displaying items 1-30 of 42 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
FFSP_09252017_12_scaffold_2588_1
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

1..372
DNA (372bp) protein (124aa)
Uncharacterized protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NMK7_9SPHI
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_09252017_12_scaffold_2588_2
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

384..1382
DNA (999bp) protein (333aa)
DoxX family protein n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8EPB7_RUNSL
DoxX family protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_09252017_12_scaffold_2588_3
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

1379..1729
DNA (351bp) protein (117aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037877F0
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_09252017_12_scaffold_2588_4
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(1741..2022)
DNA (282bp) protein (94aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037551BA
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_09252017_12_scaffold_2588_5
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(2044..3126)
DNA (1083bp) protein (361aa)
DNA replication and repair protein RecF n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TFE8_NIAKG
DNA replication and repair protein RecF
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_09252017_12_scaffold_2588_6
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

3210..3731
DNA (522bp) protein (174aa)
Uracil phosphoribosyltransferase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TJ24_NIAKG
uracil phosphoribosyltransferase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_09252017_12_scaffold_2588_7
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

3752..4684
DNA (933bp) protein (311aa)
Aspartate carbamoyltransferase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TJ25_NIAKG
aspartate carbamoyltransferase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_09252017_12_scaffold_2588_8
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

4623..5168
DNA (546bp) protein (182aa)
phosphopantetheine adenylyltransferase n=1 Tax=Niabella aurantiaca RepID=UPI00037D157D
phosphopantetheine adenylyltransferase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_09252017_12_scaffold_2588_9
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

5171..5602
DNA (432bp) protein (144aa)
Phenylacetic acid degradation-related protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TJ27_NIAKG
phenylacetic acid degradation-related protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_09252017_12_scaffold_2588_10
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(5568..6029)
DNA (462bp) protein (154aa)
NUDIX hydrolase n=1 Tax=Niabella soli DSM 19437 RepID=H1NLK2_9SPHI
NUDIX hydrolase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_09252017_12_scaffold_2588_11
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

6056..6685
DNA (630bp) protein (210aa)
Orotate phosphoribosyltransferase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TJ29_NIAKG
orotate phosphoribosyltransferase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_09252017_12_scaffold_2588_12
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

6699..7100
DNA (402bp) protein (134aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037A7755
heavy metal transport/detoxification protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_09252017_12_scaffold_2588_13
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(7103..7552)
DNA (450bp) protein (150aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00035CAB2D
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_09252017_12_scaffold_2588_14
Bacteroides sp. CAG:545, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7761..8351)
DNA (591bp) protein (197aa)
NYN domain protein n=1 Tax=Bacteroides sp. CAG:545 RepID=R5RSS4_9BACE
NYN domain protein {ECO:0000313|EMBL:CCZ43738.1}; TaxID=1262742 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:545.;"
hypothetical protein
FFSP_09252017_12_scaffold_2588_15
unknown

Not on your lists

comp(8537..8674)
DNA (138bp) protein (46aa)

This feature has no annotations

FFSP_09252017_12_scaffold_2588_16
Lacinutrix sp. 5H-3-7-4, Lacinutrix, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(8676..10409)
DNA (1734bp) protein (578aa)
ATP-binding region ATPase domain protein n=1 Tax=Lacinutrix sp. (strain 5H-3-7-4) RepID=F6GC68_LACS5
ATP-binding protein
ATP-binding region ATPase domain protein {ECO:0000313|EMBL:AEH01414.1}; TaxID=983544 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Lacinutrix.;" source="Lacinutrix sp. (strain 5H-3-7-4).;"
FFSP_09252017_12_scaffold_2588_17
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(10416..11333)
DNA (918bp) protein (306aa)
hypothetical protein n=1 Tax=Cytophaga aurantiaca RepID=UPI00037D4D57
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_09252017_12_scaffold_2588_18
unknown

Not on your lists

11345..11545
DNA (201bp) protein (67aa)

This feature has no annotations

FFSP_09252017_12_scaffold_2588_19
unknown

Not on your lists

comp(11533..11766)
DNA (234bp) protein (78aa)

This feature has no annotations

FFSP_09252017_12_scaffold_2588_20
unknown

Not on your lists

11783..11983
DNA (201bp) protein (67aa)

This feature has no annotations

FFSP_09252017_12_scaffold_2588_21
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

12194..12673
DNA (480bp) protein (160aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000381FC9F
WbqC-like family protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_09252017_12_scaffold_2588_22
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

12731..16330
DNA (3600bp) protein (1200aa)
PKD domain containing protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TCA7_NIAKG
PKD domain-containing protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_09252017_12_scaffold_2588_23
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

16282..17016
DNA (735bp) protein (245aa)
PKD domain containing protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TCA7_NIAKG
PKD domain-containing protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_09252017_12_scaffold_2588_24
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

17018..18043
DNA (1026bp) protein (342aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036C49F1
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_09252017_12_scaffold_2588_25
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(18045..18533)
DNA (489bp) protein (163aa)
GCN5-related N-acetyltransferase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TQP1_NIAKG
N-acetyltransferase GCN5
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_09252017_12_scaffold_2588_26
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(18535..20202)
DNA (1668bp) protein (556aa)
glucose-6-phosphate isomerase n=1 Tax=Segetibacter koreensis RepID=UPI0003796FAA
glucose-6-phosphate isomerase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_09252017_12_scaffold_2588_27
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(20246..21262)
DNA (1017bp) protein (339aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003600108
threonine aldolase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_09252017_12_scaffold_2588_28
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

21386..22243
DNA (858bp) protein (286aa)
RNA polymerase, sigma 70 subunit, RpoD subfamily n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TE96_NIAKG
RpoD subfamily RNA polymerase sigma-70 subunit
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_09252017_12_scaffold_2588_29
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

22352..23227
DNA (876bp) protein (292aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037113A5
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
FFSP_09252017_12_scaffold_2588_30
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

23237..24181
DNA (945bp) protein (315aa)
Thioredoxin reductase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TE98_NIAKG
thioredoxin reductase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
Displaying items 1-30 of 42 in total

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