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FFSP_09252017_12_Sphingobacteria_36_66

FFSP_09252017_12_RIFOXYD2_FULL_Sphingobacteria_35_12_curated_36_66
In projects: FFSP_09252017_12  |  SOB_across_mines

Consensus taxonomy: RIFOXYD2_FULL_Sphingobacteria_35_12_curated  →  Sphingobacteria  →  Bacteroidetes  →  Bacteria

Taxonomy override: Bacteroidetes

Displaying items 51-100 of 187 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
FFSP_09252017_12_scaffold_4485
Species: RIFOXYD2_FULL_Sphingobacteria_35_12_curated (100%)
9 8879 bp 35.51 79.43 92.71
FFSP_09252017_12_scaffold_10807
Species: RIFOXYD2_FULL_Sphingobacteria_35_12_curated (50%)
2 2783 bp 35.18 52.71 92.92
FFSP_09252017_12_scaffold_2673
Species: RIFOXYD2_FULL_Sphingobacteria_35_12_curated (91.67%)
12 16859 bp 35.79 55.68 92.94
FFSP_09252017_12_scaffold_9333
Species: RIFOXYD2_FULL_Sphingobacteria_35_12_curated (75%)
4 3153 bp 39.71 42.39 92.96
FFSP_09252017_12_scaffold_10956
Species: RIFOXYD2_FULL_Sphingobacteria_35_12_curated (100%)
5 3817 bp 34.58 58.99 92.98
FFSP_09252017_12_scaffold_1189
Species: RIFOXYD2_FULL_Sphingobacteria_35_12_curated (96.55%)
29 27820 bp 34.72 74.26 93.02
FFSP_09252017_12_scaffold_15641
Species: Flavihumibacter solisilvae (50%)
2 2030 bp 38.97 62.73 93.10
FFSP_09252017_12_scaffold_10557
Species: RIFOXYD2_FULL_Sphingobacteria_35_12_curated (100%)
5 3441 bp 35.80 58.15 93.11
FFSP_09252017_12_scaffold_1421
Species: RIFOXYD2_FULL_Sphingobacteria_35_12_curated (97.14%)
35 42031 bp 35.53 69.80 93.14
FFSP_09252017_12_scaffold_6867
Species: RIFOXYD2_FULL_Sphingobacteria_35_12_curated (100%)
3 4124 bp 39.60 77.66 93.26
FFSP_09252017_12_scaffold_3554
Species: RIFOXYD2_FULL_Sphingobacteria_35_12_curated (80.65%)
31 24814 bp 36.93 60.71 93.42
FFSP_09252017_12_scaffold_20310
Species: RIFOXYD2_FULL_Sphingobacteria_35_12_curated (100%)
1 1628 bp 30.53 53.72 93.43
FFSP_09252017_12_scaffold_3864
Species: RIFOXYD2_FULL_Sphingobacteria_35_12_curated (97.87%)
47 46900 bp 36.22 69.63 93.44
FFSP_09252017_12_scaffold_8107
Species: RIFOXYD2_FULL_Sphingobacteria_35_12_curated (75%)
4 4545 bp 35.60 62.71 93.47
FFSP_09252017_12_scaffold_1552
Species: RIFOXYD2_FULL_Sphingobacteria_35_12_curated (94.29%)
35 30490 bp 36.87 76.48 93.49
FFSP_09252017_12_scaffold_2987
Species: RIFOXYD2_FULL_Sphingobacteria_35_12_curated (100%)
5 8782 bp 35.83 76.20 93.50
FFSP_09252017_12_scaffold_10243
Species: RIFOXYD2_FULL_Sphingobacteria_35_12_curated (100%)
7 6248 bp 36.52 68.61 93.53
FFSP_09252017_12_scaffold_769
Species: RIFOXYD2_FULL_Sphingobacteria_35_12_curated (100%)
56 57238 bp 34.91 67.97 93.55
FFSP_09252017_12_scaffold_524
Phylum: Bacteroidetes (79.49%)
39 44551 bp 35.20 69.00 93.63
FFSP_09252017_12_scaffold_14682
Species: RIFOXYD2_FULL_Sphingobacteria_35_12_curated (100%)
2 2144 bp 34.42 70.17 93.75
FFSP_09252017_12_scaffold_5463
Species: RIFOXYD2_FULL_Sphingobacteria_35_12_curated (100%)
12 13539 bp 38.02 81.95 93.77
FFSP_09252017_12_scaffold_2376
Species: RIFOXYD2_FULL_Sphingobacteria_35_12_curated (84.62%)
13 18031 bp 36.43 53.95 93.88
FFSP_09252017_12_scaffold_3724
Species: RIFOXYD2_FULL_Sphingobacteria_35_12_curated (100%)
18 20210 bp 34.89 76.69 93.92
FFSP_09252017_12_scaffold_11565
Species: RIFOXYD2_FULL_Sphingobacteria_35_12_curated (100%)
4 3155 bp 33.79 71.74 93.95
FFSP_09252017_12_scaffold_636
Species: RIFOXYD2_FULL_Sphingobacteria_35_12_curated (89.29%)
28 33289 bp 35.54 46.20 93.96
FFSP_09252017_12_scaffold_7681
Species: RIFOXYD2_FULL_Sphingobacteria_35_12_curated (100%)
9 6659 bp 36.45 61.45 94.02
FFSP_09252017_12_scaffold_10296
Species: RIFOXYD2_FULL_Sphingobacteria_35_12_curated (100%)
3 2899 bp 36.08 71.92 94.07
FFSP_09252017_12_scaffold_1497
Species: RIFOXYD2_FULL_Sphingobacteria_35_12_curated (100%)
16 20324 bp 34.69 74.77 94.09
FFSP_09252017_12_scaffold_41107
Species: RIFOXYD2_FULL_Sphingobacteria_35_12_curated (100%)
3 2171 bp 40.12 40.76 94.10
FFSP_09252017_12_scaffold_8687
Species: RIFOXYD2_FULL_Sphingobacteria_35_12_curated (57.14%)
7 7040 bp 37.06 55.89 94.30
FFSP_09252017_12_scaffold_1257
Species: RIFOXYD2_FULL_Sphingobacteria_35_12_curated (94.12%)
17 19395 bp 36.37 71.59 94.40
FFSP_09252017_12_scaffold_2414
Species: RIFOXYD2_FULL_Sphingobacteria_35_12_curated (100%)
13 13888 bp 35.53 38.40 94.42
FFSP_09252017_12_scaffold_11130
Species: RIFOXYD2_FULL_Sphingobacteria_35_12_curated (100%)
3 2713 bp 34.57 76.13 94.43
FFSP_09252017_12_scaffold_1841
Species: RIFOXYD2_FULL_Sphingobacteria_35_12_curated (91.3%)
23 20908 bp 35.81 77.79 94.47
FFSP_09252017_12_scaffold_3338
Species: RIFOXYD2_FULL_Sphingobacteria_35_12_curated (100%)
13 12702 bp 36.09 72.44 94.54
FFSP_09252017_12_scaffold_4546
Species: RIFOXYD2_FULL_Sphingobacteria_35_12_curated (100%)
7 5951 bp 36.03 76.30 94.57
FFSP_09252017_12_scaffold_6812
Species: RIFOXYD2_FULL_Sphingobacteria_35_12_curated (60%)
5 4150 bp 36.58 66.72 94.63
FFSP_09252017_12_scaffold_1897
Species: RIFOXYD2_FULL_Sphingobacteria_35_12_curated (95.45%)
44 47124 bp 36.37 66.82 94.70
FFSP_09252017_12_scaffold_2268
Species: RIFOXYD2_FULL_Sphingobacteria_35_12_curated (80%)
15 11805 bp 33.71 56.35 94.74
FFSP_09252017_12_scaffold_1545
Species: RIFOXYD2_FULL_Sphingobacteria_35_12_curated (95%)
20 16289 bp 35.21 65.65 94.76
FFSP_09252017_12_scaffold_4601
Species: RIFOXYD2_FULL_Sphingobacteria_35_12_curated (92.86%)
14 14196 bp 34.23 52.94 94.84
FFSP_09252017_12_scaffold_20674
Species: RIFOXYD2_FULL_Sphingobacteria_35_12_curated (100%)
2 1603 bp 37.74 60.54 94.88
FFSP_09252017_12_scaffold_3835
Species: RIFOXYD2_FULL_Sphingobacteria_35_12_curated (100%)
25 18931 bp 32.51 51.79 94.96
FFSP_09252017_12_scaffold_3118
Species: RIFOXYD2_FULL_Sphingobacteria_35_12_curated (100%)
12 10773 bp 36.15 76.02 94.96
FFSP_09252017_12_scaffold_3672
Species: RIFOXYD2_FULL_Sphingobacteria_35_12_curated (93.33%)
15 10934 bp 36.30 69.58 95.02
FFSP_09252017_12_scaffold_2731
Species: RIFOXYD2_FULL_Sphingobacteria_35_12_curated (100%)
18 16823 bp 37.26 70.36 95.07
FFSP_09252017_12_scaffold_4526
Species: RIFOXYD2_FULL_Sphingobacteria_35_12_curated (100%)
11 7689 bp 35.47 45.73 95.08
FFSP_09252017_12_scaffold_3129
Species: RIFOXYD2_FULL_Sphingobacteria_35_12_curated (100%)
16 15752 bp 36.06 80.64 95.09
FFSP_09252017_12_scaffold_1194
Species: RIFOXYD2_FULL_Sphingobacteria_35_12_curated (100%)
31 37166 bp 35.68 67.07 95.12
FFSP_09252017_12_scaffold_1273
Species: RIFOXYD2_FULL_Sphingobacteria_35_12_curated (98.18%)
55 54245 bp 36.89 67.73 95.30
Displaying items 51-100 of 187 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.