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FFV18_Bp1_scaffold_178111

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
FFV18_Bp1_scaffold_178111_1
Acetohalobium arabaticum, Acetohalobium, Halanaerobiales, Clostridia, Firmicutes, Bacteria

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comp(1..126)
DNA (126bp) protein (42aa)
50S ribosomal protein L20 n=1 Tax=Holophaga foetida DSM 6591 RepID=H1P5R6_9BACT
50S ribosomal protein L20 {ECO:0000256|HAMAP-Rule:MF_00382, ECO:0000256|RuleBase:RU000560}; TaxID=574087 species="Bacteria; Firmicutes; Clostridia; Halanaerobiales; Halobacteroidaceae; Acetohalobium.;" source="Acetohalobium arabaticum (strain ATCC 49924 / DSM 5501 / Z-7288).;"
FFV18_Bp1_scaffold_178111_2
unknown

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216..431
DNA (216bp) protein (72aa)

This feature has no annotations

FFV18_Bp1_scaffold_178111_3
RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated, Acidobacteria, Bacteria

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comp(681..1388)
DNA (708bp) protein (236aa)
Translation initiation factor IF-3 n=1 Tax=Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17) RepID=F6CQH3_DESK7
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated
FFV18_Bp1_scaffold_178111_4
RBG_16_Nitrospirae_43_11_curated, Nitrospirae, Bacteria

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comp(1487..3277)
DNA (1791bp) protein (597aa)
Threonine--tRNA ligase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IHB5_KORVE
Tax=RBG_16_Nitrospirae_43_11_curated
FFV18_Bp1_scaffold_178111_trna_1
unknown

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comp(3406..3477)
DNA (72bp)
transferRNA Val
FFV18_Bp1_scaffold_178111_5
Candidatus Brocadia sinica, Candidatus Brocadia, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

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4394..5479
DNA (1086bp) protein (362aa)
hypothetical protein n=1 Tax=Hydrogenedentes bacterium JGI 0000039-J10 RepID=UPI0003608EA7
Conserved hypothetical signal transduction HD GYP protein {ECO:0000313|EMBL:GAN34090.1}; TaxID=1197129 species="Bacteria; Planctomycetes; Planctomycetia; Candidatus Brocadiales; Candidatus Brocadiaceae; Candidatus Brocadia.;" source="Candidatus Brocadia sinica JPN1.;"
FFV18_Bp1_scaffold_178111_6
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5739..6437
DNA (699bp) protein (233aa)
Uncharacterized protein n=1 Tax=Clostridium botulinum Bf RepID=B1QMQ9_CLOBO
Uncharacterized protein {ECO:0000313|EMBL:AJE10749.1}; TaxID=1408283 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum CDC_1436.;"
FFV18_Bp1_scaffold_178111_7
Terriglobus saanensis, Terriglobus, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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comp(6737..8389)
DNA (1653bp) protein (551aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI000380C118
Uncharacterized protein {ECO:0000313|EMBL:ADV85003.1}; Flags: Precursor;; TaxID=401053 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Terriglobus.;" source="Terriglobus saanensis (strain ATCC BAA-1853 / DSM 23119 / SP1PR4).;"
FFV18_Bp1_scaffold_178111_8
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

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8710..10194
DNA (1485bp) protein (495aa)
amt:Amet_4616 leucyl aminopeptidase (EC:3.4.11.1); K01255 leucyl aminopeptidase [EC:3.4.11.1] id=1241122 bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi
Tax=RBG_16_Acidobacteria_70_10_curated
FFV18_Bp1_scaffold_178111_9
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

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10220..10615
DNA (396bp) protein (132aa)
response regulator receiver protein id=14424850 bin=bin1_lowGC tax=bin1_lowGC organism_group=Unknown_CP
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
FFV18_Bp1_scaffold_178111_10
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

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comp(10664..11308)
DNA (645bp) protein (215aa)
Dephospho-CoA kinase id=4904570 bin=GWC2_Nitrospirae_57_13 species=Desulfococcus oleovorans genus=Desulfococcus taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
FFV18_Bp1_scaffold_178111_11
R_Acidobacteria_65_29, Acidobacteria, Bacteria

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comp(11348..12274)
DNA (927bp) protein (309aa)
id=12555789 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
FFV18_Bp1_scaffold_178111_12
unknown

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comp(12591..12788)
DNA (198bp) protein (66aa)

This feature has no annotations

FFV18_Bp1_scaffold_178111_13
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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12889..16440
DNA (3552bp) protein (1184aa)
Cna B-type protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01RF0_SOLUE
Cna B-type protein {ECO:0000313|EMBL:ABJ87770.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
FFV18_Bp1_scaffold_178111_14
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

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16815..17552
DNA (738bp) protein (246aa)
metallophosphoesterase id=24421803 bin=RBG_19FT_COMBO_Aminicenantes_65_30 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_19FT_COMBO_Aminicenantes_65_30 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
FFV18_Bp1_scaffold_178111_15
Meiothermus ruber, Meiothermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

17974..19011
DNA (1038bp) protein (346aa)
tRNA pseudouridine synthase D {ECO:0000256|HAMAP-Rule:MF_01082}; EC=5.4.99.27 {ECO:0000256|HAMAP-Rule:MF_01082};; tRNA pseudouridine(13) synthase {ECO:0000256|HAMAP-Rule:MF_01082}; tRNA pseudouridylate synthase D {ECO:0000256|HAMAP-Rule:MF_01082}; tRNA-uridine isomerase D {ECO:0000256|HAMAP-Rule:MF_01082}; TaxID=504728 species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Meiothermus.;" source="Meiothermus ruber (strain ATCC 35948 / DSM 1279 / VKM B-1258 / 21); (Thermus ruber).;"
tRNA pseudouridine synthase D n=1 Tax=Meiothermus ruber (strain ATCC 35948 / DSM 1279 / VKM B-1258 / 21) RepID=D3PQN7_MEIRD
Displaying 16 items

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