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FFV18_Bp1_scaffold_132961

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
FFV18_Bp1_scaffold_132961_1
Acidobacterium capsulatum, Acidobacterium, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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comp(176..1663)
DNA (1488bp) protein (496aa)
Probable glycine dehydrogenase (decarboxylating) subunit 2 {ECO:0000256|HAMAP-Rule:MF_00713}; EC=1.4.4.2 {ECO:0000256|HAMAP-Rule:MF_00713};; Glycine cleavage system P-protein subunit 2 {ECO:0000256|HAMAP-Rule:MF_00713}; Glycine decarboxylase subunit 2 {ECO:0000256|HAMAP-Rule:MF_00713}; Glycine dehydrogenase (aminomethyl-transferring) subunit 2 {ECO:0000256|HAMAP-Rule:MF_00713}; TaxID=240015 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Acidobacterium.;" source="Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670 /; NBRC 15755 / NCIMB 13165 / 161).;"
Probable glycine dehydrogenase (decarboxylating) subunit 2 n=1 Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F936_ACIC5
FFV18_Bp1_scaffold_132961_2
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

comp(1720..3069)
DNA (1350bp) protein (450aa)
Probable glycine dehydrogenase [decarboxylating] subunit 1 id=4385686 bin=GWC2_Pelobacter_58_13 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Pelobacter_58_13 organism_group=Deltaproteobacteria organism_desc=Good +
Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
FFV18_Bp1_scaffold_132961_3
RBG_19FT_COMBO_Deltaproteobacteria_58_16_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3069..3458)
DNA (390bp) protein (130aa)
Glycine cleavage system H protein id=4734606 bin=GWC2_Deltaproteobacteria_55_46 species=Carboxydothermus hydrogenoformans genus=Carboxydothermus taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Deltaproteobacteria_55_46 organism_group=Deltaproteobacteria organism_desc=Clade sibling to the Geobacter/Pelobacter
Tax=RBG_19FT_COMBO_Deltaproteobacteria_58_16_curated
FFV18_Bp1_scaffold_132961_4
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(3598..4671)
DNA (1074bp) protein (358aa)
Aminomethyltransferase {ECO:0000256|HAMAP-Rule:MF_00259, ECO:0000256|RuleBase:RU003981}; EC=2.1.2.10 {ECO:0000256|HAMAP-Rule:MF_00259, ECO:0000256|RuleBase:RU003981};; Glycine cleavage system T protein {ECO:0000256|HAMAP-Rule:MF_00259}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
gcvT; glycine cleavage system T-protein (aminomethyltransferase) (EC:2.1.2.10) id=24429616 bin=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
FFV18_Bp1_scaffold_132961_5
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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5167..7965
DNA (2799bp) protein (933aa)
Peptidase S16B family protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AA51_GEMAT
Peptidase M16 domain protein {ECO:0000313|EMBL:AHG91744.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
FFV18_Bp1_scaffold_132961_6
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(9012..10187)
DNA (1176bp) protein (392aa)
L-threonine synthase {ECO:0000313|EMBL:CDM65753.1}; EC=4.2.3.1 {ECO:0000313|EMBL:CDM65753.1};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
L-threonine synthase id=1890677 bin=GWD2_Deltaproteobacteria_55_8 species=Candidatus Solibacter usitatus genus=Candidatus Solibacter taxon_order=Solibacterales taxon_class=Solibacteres phylum=Acidobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
FFV18_Bp1_scaffold_132961_trna_1
unknown

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10633..10705
DNA (73bp)
transferRNA Lys
FFV18_Bp1_scaffold_132961_7
R_RIF_OD1_13_52_23, RIF-OD1-13, Parcubacteria, Bacteria

Not on your lists

10970..11221
DNA (252bp) protein (84aa)
hypothetical protein id=14425939 bin=bin1_lowGC species=Methanoplanus limicola genus=Methanoplanus taxon_order=Methanomicrobiales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=bin1_lowGC organism_group=Unknown_CP
Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_13_52_23_curated
FFV18_Bp1_scaffold_132961_8
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

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11218..11448
DNA (231bp) protein (77aa)
YcfA-like n=1 Tax=Rhodopseudomonas palustris (strain HaA2) RepID=Q2IR98_RHOP2
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
FFV18_Bp1_scaffold_132961_9
RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated, Acidobacteria, Bacteria

Not on your lists


11968..13296
DNA (1329bp) protein (443aa)
Signal recognition particle protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q024L4_SOLUE
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated
FFV18_Bp1_scaffold_132961_10
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


13435..13761
DNA (327bp) protein (109aa)
30S ribosomal protein S16 n=1 Tax=Clostridium sp. CAG:226 RepID=R5B2U0_9CLOT
30S ribosomal protein S16 {ECO:0000256|HAMAP-Rule:MF_00385}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
FFV18_Bp1_scaffold_132961_11
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

13839..14069
DNA (231bp) protein (77aa)
RNA-binding protein (KH domain); K06960 id=108785 bin=ACD73 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=ACD73 organism_group=Proteobacteria organism_desc=Unknown
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
FFV18_Bp1_scaffold_132961_12
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

14066..14611
DNA (546bp) protein (182aa)
Ribosome maturation factor RimM n=1 Tax=uncultured Acidobacteria bacterium RepID=H5SIU5_9BACT
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00006662}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
FFV18_Bp1_scaffold_132961_13
RBG_13_Aminicenantes_64_14_curated, Aminicenantes, Bacteria

Not on your lists

14608..15318
DNA (711bp) protein (237aa)
tRNA (guanine-N1)-methyltransferase (EC:2.1.1.31); K00554 tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] id=24441458 bin=RBG_19FT_COMBO_Aminicenantes_65_30 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_19FT_COMBO_Aminicenantes_65_30 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
Tax=RBG_13_Aminicenantes_64_14_curated
FFV18_Bp1_scaffold_132961_14
Alicyclobacillus acidoterrestris, Alicyclobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


15371..15766
DNA (396bp) protein (132aa)
50S ribosomal protein L19 n=1 Tax=Alicyclobacillus acidoterrestris ATCC 49025 RepID=T0BQK3_9BACL
50S ribosomal protein L19 {ECO:0000256|HAMAP-Rule:MF_00402, ECO:0000256|RuleBase:RU000559}; TaxID=1356854 species="Bacteria; Firmicutes; Bacilli; Bacillales; Alicyclobacillaceae; Alicyclobacillus.;" source="Alicyclobacillus acidoterrestris ATCC 49025.;"
FFV18_Bp1_scaffold_132961_15
Desulfitobacterium metallireducens, Desulfitobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15766..16383
DNA (618bp) protein (206aa)
Ribonuclease HII {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SAAS00016879}; Short=RNase HII {ECO:0000256|HAMAP-Rule:MF_00052};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SAAS00016872};; TaxID=871968 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfitobacterium.;" source="Desulfitobacterium metallireducens DSM 15288.;"
Ribonuclease HII n=1 Tax=Desulfitobacterium metallireducens DSM 15288 RepID=G6GKM3_9FIRM
FFV18_Bp1_scaffold_132961_16
GWA2_Deltaproteobacteria_47_9_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16386..18722
DNA (2337bp) protein (779aa)
TPR repeat-containing protein id=4127918 bin=GWF2_Nitrospirae_44_13 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=TA06 tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
Tax=GWA2_Deltaproteobacteria_47_9_curated
FFV18_Bp1_scaffold_132961_17
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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19021..19275
DNA (255bp) protein (85aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI0003725AFB
Uncharacterized protein {ECO:0000313|EMBL:ABF43379.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strain Ellin345).;"
FFV18_Bp1_scaffold_132961_18
unknown

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19422..19511
DNA (90bp) protein (30aa)

This feature has no annotations

Displaying 19 items

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