ggKbase home page

FFV18_Bp1_scaffold_306613

Search features with annotation key words

Displaying items 1-30 of 49 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
FFV18_Bp1_scaffold_306613_1
unknown

Not on your lists

comp(73..456)
DNA (384bp) protein (128aa)

This feature has no annotations

FFV18_Bp1_scaffold_306613_2
unknown

Not on your lists

542..679
DNA (138bp) protein (46aa)

This feature has no annotations

FFV18_Bp1_scaffold_306613_3
RBG_16_Deltaproteobacteria_50_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

756..1883
DNA (1128bp) protein (376aa)
Na-Ca exchanger/integrin-beta4 n=1 Tax=Trichodesmium erythraeum (strain IMS101) RepID=Q10W91_TRIEI
Tax=RBG_16_Deltaproteobacteria_50_11_curated
FFV18_Bp1_scaffold_306613_4
unknown

Not on your lists

2458..2631
DNA (174bp) protein (58aa)

This feature has no annotations

FFV18_Bp1_scaffold_306613_5
Nitrospina gracilis, Nitrospina, Nitrospinales, Nitrospinia, Nitrospinae, Bacteria

Not on your lists

2680..3297
DNA (618bp) protein (206aa)
RNA polymerase sigma factor n=1 Tax=Nitrospina gracilis 3/211 RepID=M1Z2C7_9BACT
RNA polymerase sigma factor {ECO:0000313|EMBL:CCQ91896.1}; TaxID=1266370 species="Bacteria; Nitrospinae; Nitrospinia; Nitrospinales; Nitrospinaceae; Nitrospina.;" source="Nitrospina gracilis (strain 3/211).;"
FFV18_Bp1_scaffold_306613_6
Myxococcus fulvus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3294..3605
DNA (312bp) protein (104aa)
Uncharacterized protein n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7ULE3_MYXSD
Uncharacterized protein {ECO:0000313|EMBL:AKF83706.1}; TaxID=1334629 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus fulvus 124B02.;"
FFV18_Bp1_scaffold_306613_7
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

3977..5125
DNA (1149bp) protein (383aa)
low-affinity phosphate transport protein; K03306 inorganic phosphate transporter, PiT family id=14426463 bin=bin1_lowGC species=Sorangium cellulosum genus=Sorangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
Tax=CSP1_2_Dadabacteria
FFV18_Bp1_scaffold_306613_8
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

5307..7814
DNA (2508bp) protein (836aa)
Arsenite methyltransferase (EC:2.1.1.137) id=14426461 bin=bin1_lowGC species=Desulfurivibrio alkaliphilus genus=Desulfurivibrio taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
Tax=CSP1_2_Dadabacteria
FFV18_Bp1_scaffold_306613_9
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

comp(8008..8742)
DNA (735bp) protein (245aa)
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
FFV18_Bp1_scaffold_306613_10
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(8909..12178)
DNA (3270bp) protein (1090aa)
Heavy metal efflux pump, CzcA family id=3630095 bin=GWA2_Elusimicrobia_69_24 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
Tax=RBG_16_Acidobacteria_70_10_curated
FFV18_Bp1_scaffold_306613_11
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12503..13840)
DNA (1338bp) protein (446aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HI95_ANADF
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:ABS28441.1}; Flags: Precursor;; TaxID=404589 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter sp. (strain Fw109-5).;"
FFV18_Bp1_scaffold_306613_12
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

comp(13868..15259)
DNA (1392bp) protein (464aa)
outer membrane efflux protein id=14425848 bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin1_lowGC organism_group=Unknown_CP
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
FFV18_Bp1_scaffold_306613_13
RBG_16_RIF05_58_8_curated, RIF5, Bacteria

Not on your lists

comp(15524..16138)
DNA (615bp) protein (205aa)
Uncharacterized protein id=2823901 bin=GWA2_Elusimicrobia_66_18 species=Methylacidiphilum infernorum genus=Methylacidiphilum taxon_order=Methylacidiphilales taxon_class=unknown phylum=Verrucomicrobia tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
Tax=RBG_16_RIF05_58_8_curated
FFV18_Bp1_scaffold_306613_14
unknown

Not on your lists

comp(16311..16739)
DNA (429bp) protein (143aa)

This feature has no annotations

FFV18_Bp1_scaffold_306613_15
unknown

Not on your lists

17009..17236
DNA (228bp) protein (76aa)

This feature has no annotations

FFV18_Bp1_scaffold_306613_16
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17642..20434)
DNA (2793bp) protein (931aa)
CoA-binding domain protein id=3061169 bin=GWA2_Elusimicrobia_69_24 species=Thermaerobacter marianensis genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
FFV18_Bp1_scaffold_306613_17
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(20601..21503)
DNA (903bp) protein (301aa)
Universal stress protein n=1 Tax=sediment metagenome RepID=D9PJN8_9ZZZZ
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
FFV18_Bp1_scaffold_306613_18
BJP_IG2069_Desfulfarculales_53_13, Desulfarculales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21985..22899
DNA (915bp) protein (305aa)
Universal stress protein n=1 Tax=Haloferax mediterranei (strain ATCC 33500 / DSM 1411 / JCM 8866 / NBRC 14739 / NCIMB 2177 / R-4) RepID=I3RA88_HALMT
Tax=BJP_IG2069_Desfulfarculales_53_13
FFV18_Bp1_scaffold_306613_19
RBG_13_Aminicenantes_64_14_curated, Aminicenantes, Bacteria

Not on your lists

22942..23397
DNA (456bp) protein (152aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI00035C8822
Tax=RBG_13_Aminicenantes_64_14_curated
FFV18_Bp1_scaffold_306613_20
unknown

Not on your lists

23522..23848
DNA (327bp) protein (109aa)

This feature has no annotations

FFV18_Bp1_scaffold_306613_21
unknown

Not on your lists

comp(23825..24388)
DNA (564bp) protein (188aa)

This feature has no annotations

FFV18_Bp1_scaffold_306613_22
unknown

Not on your lists

comp(24828..24977)
DNA (150bp) protein (50aa)

This feature has no annotations

FFV18_Bp1_scaffold_306613_23
RBG_13_OP8X_37_8_curated, OP8X, Bacteria

Not on your lists

25053..27170
DNA (2118bp) protein (706aa)
PAS/PAC sensor signal transduction histidine kinase n=1 Tax=Azoarcus sp. KH32C RepID=H0PV77_9RHOO
Tax=RBG_13_OP8X_37_8_curated
FFV18_Bp1_scaffold_306613_24
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

27293..28696
DNA (1404bp) protein (468aa)
Two component, sigma54 specific, transcriptional regulator, Fis family n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1ITP4_KORVE
Two component, sigma54 specific, transcriptional regulator, Fis family {ECO:0000313|EMBL:ABF39756.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strain Ellin345).;"
FFV18_Bp1_scaffold_306613_25
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

comp(29019..30554)
DNA (1536bp) protein (512aa)
Mg chelatase-related protein n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LGZ6_CHLTF
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
FFV18_Bp1_scaffold_306613_26
Archaeoglobus fulgidus, Archaeoglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

Not on your lists

comp(30739..31824)
DNA (1086bp) protein (362aa)
hypothetical protein n=1 Tax=Geitlerinema sp. PCC 7105 RepID=UPI00034C4255
Lipopolysaccharide biosynthesis protein {ECO:0000313|EMBL:AIG97130.1}; TaxID=1344584 species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Archaeoglobus.;" source="Archaeoglobus fulgidus DSM 8774.;"
FFV18_Bp1_scaffold_306613_27
unknown

Not on your lists

comp(32051..32218)
DNA (168bp) protein (56aa)

This feature has no annotations

FFV18_Bp1_scaffold_306613_28
RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(32238..34592)
DNA (2355bp) protein (785aa)
Glycosyl transferase, family 2 n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01PS5_SOLUE
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated
FFV18_Bp1_scaffold_306613_29
GWD2_Elusimicrobia_63_28_curated, Elusimicrobia, Bacteria

Not on your lists

comp(34679..37330)
DNA (2652bp) protein (884aa)
Uncharacterized protein n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MJ28_9BACT
Tax=GWD2_Elusimicrobia_63_28_curated
FFV18_Bp1_scaffold_306613_30
RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(37327..38631)
DNA (1305bp) protein (435aa)
ABC transporter related n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01PS7_SOLUE
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated
Displaying items 1-30 of 49 in total

View Taxonomy