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FFV18_Bp1_scaffold_515697

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
FFV18_Bp1_scaffold_515697_1
RBG_19FT_COMBO_Chloroflexi_56_12_curated, Chloroflexi, Bacteria

Not on your lists

comp(2..145)
DNA (144bp) protein (48aa)
Integrase family protein n=1 Tax=Burkholderia sp. BT03 RepID=J3BEU6_9BURK
Tax=RBG_19FT_COMBO_Chloroflexi_56_12_curated
FFV18_Bp1_scaffold_515697_2

Not on your lists

comp(194..550)
DNA (357bp) protein (119aa)
IstB domain protein ATP-binding protein n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GDR9_GEOUR
Uncharacterized protein {ECO:0000313|EMBL:KKK52348.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
FFV18_Bp1_scaffold_515697_3
R_Dadabacteria_53_21, Dadabacteria, Bacteria

Not on your lists

comp(1171..1596)
DNA (426bp) protein (142aa)
Tax=RIFCSPHIGHO2_12_FULL_Dadabacteria_53_21_curated
FFV18_Bp1_scaffold_515697_4
unknown

Not on your lists

comp(1601..2119)
DNA (519bp) protein (173aa)

This feature has no annotations

FFV18_Bp1_scaffold_515697_5
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

comp(2116..2661)
DNA (546bp) protein (182aa)
ECF subfamily RNA polymerase sigma-24 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily id=14424400 bin=bin1_lowGC species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=bin1_lowGC organism_group=Unknown_CP
Tax=CSP1_2_Dadabacteria
FFV18_Bp1_scaffold_515697_6
bacterium UASB14, Bacteria

Not on your lists

2879..5047
DNA (2169bp) protein (723aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1499966 species="Bacteria.;" source="bacterium UASB14.;"
Putative signal transduction histidine kinase n=1 Tax=uncultured bacterium RepID=Q20JX4_9BACT
FFV18_Bp1_scaffold_515697_7
RBG_13_Caldithrix_44_9_curated, Caldithrix, Bacteria

Not on your lists

5090..6511
DNA (1422bp) protein (474aa)
Two component, sigma54 specific, transcriptional regulator, Fis family n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XUJ7_9BACT
Tax=RBG_13_Caldithrix_44_9_curated
FFV18_Bp1_scaffold_515697_8
Peptococcaceae bacterium BRH_c8a, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6696..7379
DNA (684bp) protein (228aa)
RNA polymerase sigma factor, sigma-70 family n=1 Tax=Desulfotomaculum gibsoniae DSM 7213 RepID=R4KDW1_9FIRM
RNA polymerase subunit sigma-24 {ECO:0000313|EMBL:KJS10614.1}; TaxID=1629715 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae.;" source="Peptococcaceae bacterium BRH_c8a.;"
FFV18_Bp1_scaffold_515697_9
Chloracidobacterium thermophilum, Chloracidobacterium, Acidobacteria, Bacteria

Not on your lists

7768..8889
DNA (1122bp) protein (374aa)
tRNA-specific 2-thiouridylase MnmA {ECO:0000256|HAMAP-Rule:MF_00144}; EC=2.8.1.- {ECO:0000256|HAMAP-Rule:MF_00144};; TaxID=981222 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Chloracidobacterium.;" source="Chloracidobacterium thermophilum (strain B).;"
tRNA-specific 2-thiouridylase MnmA n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LDQ3_CHLTF
FFV18_Bp1_scaffold_515697_10
RBG_16_Deltaproteobacteria_50_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8855..10087
DNA (1233bp) protein (411aa)
Lipid-A-disaccharide synthase n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7UFX9_MYXSD
Tax=RBG_16_Deltaproteobacteria_50_11_curated
FFV18_Bp1_scaffold_515697_11
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

10216..12222
DNA (2007bp) protein (669aa)
Peptidase M1, membrane alanine aminopeptidase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q02AZ5_SOLUE
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
FFV18_Bp1_scaffold_515697_12
unknown

Not on your lists

12683..13351
DNA (669bp) protein (223aa)

This feature has no annotations

FFV18_Bp1_scaffold_515697_13
GWC2_Nitrospirae_56_14_curated, Nitrospirae, Bacteria

Not on your lists

13464..15164
DNA (1701bp) protein (567aa)
DNA polymerase III, subunits gamma and tau id=3315079 bin=GWC2_Nitrospirae-rel_56_14 species=Thermincola potens genus=Thermincola taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
Tax=GWC2_Nitrospirae_56_14_curated
FFV18_Bp1_scaffold_515697_14

Not on your lists

15334..16323
DNA (990bp) protein (330aa)
argE; acetylornithine deacetylase (EC:3.5.1.16) id=24403765 bin=RBG_19FT_COMBO_Aminicenantes_65_30 species=Acidobacterium capsulatum genus=Acidobacterium taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=RBG_19FT_COMBO_Aminicenantes_65_30 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
Uncharacterized protein {ECO:0000313|EMBL:KKM99834.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
FFV18_Bp1_scaffold_515697_15
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

16837..17475
DNA (639bp) protein (213aa)
MgtC/SapB transporter n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1INC6_KORVE
MgtC/SapB transporter {ECO:0000313|EMBL:ABF41624.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strain Ellin345).;"
FFV18_Bp1_scaffold_515697_16
unknown

Not on your lists

17475..17984
DNA (510bp) protein (170aa)

This feature has no annotations

FFV18_Bp1_scaffold_515697_17
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(18012..18497)
DNA (486bp) protein (162aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HJV6_9RHIZ
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
FFV18_Bp1_scaffold_515697_18
Halanaerobium praevalens, Halanaerobium, Halanaerobiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18598..19368)
DNA (771bp) protein (257aa)
Filamentation induced by cAMP protein Fic n=1 Tax=Halanaerobium praevalens (strain ATCC 33744 / DSM 2228 / GSL) RepID=E3DN81_HALPG
Filamentation induced by cAMP protein Fic {ECO:0000313|EMBL:ADO77500.1}; TaxID=572479 species="Bacteria; Firmicutes; Clostridia; Halanaerobiales; Halanaerobiaceae; Halanaerobium.;" source="Halanaerobium praevalens (strain ATCC 33744 / DSM 2228 / GSL).;"
FFV18_Bp1_scaffold_515697_19
BJP_IG2102_Syntrophobacterales_60_12, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20110..21363)
DNA (1254bp) protein (418aa)
Diaminopimelate decarboxylase id=3900975 bin=GWF2_Syntrophobacterales_56_9 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Syntrophobacterales_56_9 organism_group=Deltaproteobacteria
Tax=BJP_IG2102_Syntrophobacterales_60_12
FFV18_Bp1_scaffold_515697_20
Pelosinus sp. UFO1, Pelosinus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(21407..22225)
DNA (819bp) protein (273aa)
hypothetical protein n=1 Tax=Anaeromusa acidaminophila RepID=UPI000367563F
NUDIX hydrolase {ECO:0000313|EMBL:AIF51514.1}; TaxID=484770 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Pelosinus.;" source="Pelosinus sp. UFO1.;"
Displaying 20 items

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