ggKbase home page

FFV18_Bp1_scaffold_153917

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
FFV18_Bp1_scaffold_153917_1
RIFOXYD12_FULL_Planctomycetes_42_12_curated, Planctomycetes, Bacteria

Not on your lists

1..108
DNA (108bp) protein (36aa)
Tax=RIFOXYD12_FULL_Planctomycetes_42_12_curated
FFV18_Bp1_scaffold_153917_2
unknown

Not on your lists

comp(541..1575)
DNA (1035bp) protein (345aa)

This feature has no annotations

FFV18_Bp1_scaffold_153917_3
unknown

Not on your lists

comp(1624..1821)
DNA (198bp) protein (66aa)

This feature has no annotations

FFV18_Bp1_scaffold_153917_4
Pleurocapsa minor, Pleurocapsa, Pleurocapsales, Cyanobacteria, Bacteria

Not on your lists

comp(2227..4167)
DNA (1941bp) protein (647aa)
Small-conductance mechanosensitive channel n=1 Tax=Pleurocapsa sp. PCC 7327 RepID=K9T2Y9_9CYAN
Small-conductance mechanosensitive channel {ECO:0000313|EMBL:AFY76835.1}; Flags: Precursor;; TaxID=118163 species="Bacteria; Cyanobacteria; Pleurocapsales; Pleurocapsa.;" source="Pleurocapsa sp. PCC 7327.;"
FFV18_Bp1_scaffold_153917_5
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4318..5430)
DNA (1113bp) protein (371aa)
Glycolate oxidase iron-sulfur subunit {ECO:0000256|PIRNR:PIRNR000139}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
hypothetical protein id=14625310 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
FFV18_Bp1_scaffold_153917_6
RLO_PLX_64_10, Bacteria

Not on your lists

comp(5889..7187)
DNA (1299bp) protein (433aa)
hypothetical protein n=1 Tax=Poribacteria bacterium WGA-3G RepID=UPI0003B40810
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
FFV18_Bp1_scaffold_153917_7
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(7292..8743)
DNA (1452bp) protein (484aa)
glcD; glycolate oxidase subunit GlcD (EC:1.1.3.15) id=14625308 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Poribacteria tax=bin7_NC10_sister organism_group=NC10
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
FFV18_Bp1_scaffold_153917_8
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists


9030..9458
DNA (429bp) protein (143aa)
50S ribosomal protein L13 id=2081436 bin=GWD2_Clostridiales_32_19 species=Clostridium ultunense genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_Clostridiales_32_19 organism_group=Firmicute organism_desc=a85
Tax=RBG_16_Acidobacteria_70_10_curated
FFV18_Bp1_scaffold_153917_9
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists


9557..9946
DNA (390bp) protein (130aa)
30S ribosomal protein S9 n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LGN9_CHLTF
30S ribosomal protein S9 {ECO:0000256|HAMAP-Rule:MF_00532, ECO:0000256|RuleBase:RU003816}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
FFV18_Bp1_scaffold_153917_10
RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated, Acidobacteria, Bacteria

Not on your lists


10088..11452
DNA (1365bp) protein (455aa)
30S ribosomal protein S2 n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI00037F07A6
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated
FFV18_Bp1_scaffold_153917_11
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11485..12111
DNA (627bp) protein (209aa)
Elongation factor Ts n=1 Tax=Thermosediminibacter oceani (strain ATCC BAA-1034 / DSM 16646 / JW/IW-1228P) RepID=D9S3N5_THEOJ
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
FFV18_Bp1_scaffold_153917_12
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

12208..12939
DNA (732bp) protein (244aa)
Uridylate kinase id=8266233 bin=CD_OP8_4m species=Desulfuromonas acetoxidans genus=Desulfuromonas taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CD_OP8_4m organism_group=OP8 (Aminicenantes)
Tax=RBG_16_Acidobacteria_70_10_curated
FFV18_Bp1_scaffold_153917_13
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

13035..13592
DNA (558bp) protein (186aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI000371AA63
Ribosome-recycling factor {ECO:0000256|HAMAP-Rule:MF_00040}; Short=RRF {ECO:0000256|HAMAP-Rule:MF_00040};; Ribosome-releasing factor {ECO:0000256|HAMAP-Rule:MF_00040}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
FFV18_Bp1_scaffold_153917_14
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

13826..15097
DNA (1272bp) protein (424aa)
Peptidase M24 n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C145_SPHTD
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
FFV18_Bp1_scaffold_153917_15
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

15353..16174
DNA (822bp) protein (274aa)
Carbon-nitrogen family hydrolase n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7U755_MYXSD
Tax=RBG_16_Acidobacteria_70_10_curated
FFV18_Bp1_scaffold_153917_16
Chloracidobacterium thermophilum, Chloracidobacterium, Acidobacteria, Bacteria

Not on your lists

16191..17771
DNA (1581bp) protein (527aa)
GMP synthase [glutamine-hydrolyzing] {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008788}; EC=6.3.5.2 {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008728};; GMP synthetase {ECO:0000256|HAMAP-Rule:MF_00344}; Glutamine amidotransferase {ECO:0000256|HAMAP-Rule:MF_00344}; TaxID=981222 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Chloracidobacterium.;" source="Chloracidobacterium thermophilum (strain B).;"
GMP synthase [glutamine-hydrolyzing] n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LG49_CHLTF
FFV18_Bp1_scaffold_153917_17
unknown

Not on your lists

comp(18065..18898)
DNA (834bp) protein (278aa)

This feature has no annotations

FFV18_Bp1_scaffold_153917_18

Not on your lists

comp(19419..20273)
DNA (855bp) protein (285aa)
Integrase, catalytic region n=1 Tax=Pelobacter propionicus (strain DSM 2379) RepID=A1AQ33_PELPD
Uncharacterized protein {ECO:0000313|EMBL:KKM88763.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
FFV18_Bp1_scaffold_153917_19
Chlorobium phaeobacteroides, Chlorobium, Chlorobiales, Chlorobia, Chlorobi, Bacteria

Not on your lists

comp(20387..20701)
DNA (315bp) protein (105aa)
Transposase IS3/IS911 family protein n=1 Tax=Chlorobium phaeobacteroides (strain DSM 266) RepID=A1BGZ0_CHLPD
Transposase IS3/IS911 family protein {ECO:0000313|EMBL:ABL65667.1}; TaxID=290317 species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chlorobium/Pelodictyon group; Chlorobium.;" source="Chlorobium phaeobacteroides (strain DSM 266).;"
FFV18_Bp1_scaffold_153917_20
RBG_13_RIF03_48_7_curated, RIF3, Bacteria

Not on your lists

comp(21079..22440)
DNA (1362bp) protein (454aa)
flagellar hook-basal body protein; K02390 flagellar hook protein FlgE id=12556384 bin=CNBR_ACIDO species=unknown genus=Acidobacterium taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Tax=RBG_13_RIF03_48_7_curated
FFV18_Bp1_scaffold_153917_21
BJP_IG2069_Desfulfarculales_53_13, Desulfarculales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22564..22866)
DNA (303bp) protein (101aa)
Flagellar basal body rod modification protein n=1 Tax=Desulfatibacillum alkenivorans (strain AK-01) RepID=B8FK44_DESAA
Tax=BJP_IG2069_Desfulfarculales_53_13
FFV18_Bp1_scaffold_153917_22
unknown

Not on your lists

23697..24809
DNA (1113bp) protein (371aa)

This feature has no annotations

FFV18_Bp1_scaffold_153917_23
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24937..25542
DNA (606bp) protein (202aa)
Peptide methionine sulfoxide reductase MsrB n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G8U8_GEOUR
Tax=RBG_16_Deltaproteobacteria_64_85_curated
FFV18_Bp1_scaffold_153917_24
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(25764..29084)
DNA (3321bp) protein (1107aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q02DC2_SOLUE
Uncharacterized protein {ECO:0000313|EMBL:ABJ82298.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
FFV18_Bp1_scaffold_153917_25
unknown

Not on your lists

comp(29245..29397)
DNA (153bp) protein (51aa)

This feature has no annotations

FFV18_Bp1_scaffold_153917_26
unknown

Not on your lists

comp(29516..29968)
DNA (453bp) protein (151aa)

This feature has no annotations

FFV18_Bp1_scaffold_153917_27
unknown

Not on your lists

comp(30951..31406)
DNA (456bp) protein (152aa)

This feature has no annotations

FFV18_Bp1_scaffold_153917_28
unknown

Not on your lists

comp(31921..33663)
DNA (1743bp) protein (581aa)

This feature has no annotations

FFV18_Bp1_scaffold_153917_29
unknown

Not on your lists

comp(33641..33796)
DNA (156bp) protein (52aa)

This feature has no annotations

FFV18_Bp1_scaffold_153917_30
unknown

Not on your lists

33864..33959
DNA (96bp) protein (32aa)

This feature has no annotations

Displaying 30 items

View Taxonomy