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FFV18_Bp1_scaffold_649551

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
FFV18_Bp1_scaffold_649551_1
Bacillus amyloliquefaciens, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(27..785)
DNA (759bp) protein (253aa)
Ribonuclease PH {ECO:0000256|HAMAP-Rule:MF_00564, ECO:0000256|SAAS:SAAS00104182}; Short=RNase PH {ECO:0000256|HAMAP-Rule:MF_00564};; EC=2.7.7.56 {ECO:0000256|HAMAP-Rule:MF_00564, ECO:0000256|SAAS:SAAS00104188};; tRNA nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_00564}; TaxID=1390 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus amyloliquefaciens (Bacillus velezensis).;"
UPI00039E3B80 related cluster n=1 Tax=unknown RepID=UPI00039E3B80
FFV18_Bp1_scaffold_649551_2
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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comp(1032..1772)
DNA (741bp) protein (247aa)
RNA methyltransferase TrmH, group 3 n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1ISZ4_KORVE
RNA methyltransferase TrmH, group 3 {ECO:0000313|EMBL:ABF40006.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strain Ellin345).;"
FFV18_Bp1_scaffold_649551_3
Syntrophothermus lipocalidus, Syntrophothermus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1769..2254)
DNA (486bp) protein (162aa)
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00107, ECO:0000256|RuleBase:RU004395}; Short=MECDP-synthase {ECO:0000256|HAMAP-Rule:MF_00107};; Short=MECPP-synthase {ECO:0000256|HAMAP-Rule:MF_00107};; Short=MECPS {ECO:0000256|HAMAP-Rule:MF_00107};; EC=4.6.1.12 {ECO:0000256|HAMAP-Rule:MF_00107, ECO:0000256|RuleBase:RU004395};; TaxID=643648 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Syntrophomonadaceae; Syntrophothermus.;" source="Syntrophothermus lipocalidus (strain DSM 12680 / TGB-C1).;"
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase n=1 Tax=Syntrophothermus lipocalidus (strain DSM 12680 / TGB-C1) RepID=D7CJP8_SYNLT
FFV18_Bp1_scaffold_649551_4
Desulfobulbus propionicus, Desulfobulbus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(2445..3218)
DNA (774bp) protein (258aa)
Bifunctional enzyme IspD/IspF n=1 Tax=Desulfobulbus propionicus (strain ATCC 33891 / DSM 2032 / 1pr3) RepID=E8RBX1_DESPD
Bifunctional enzyme IspD/IspF {ECO:0000256|HAMAP-Rule:MF_01520, ECO:0000256|SAAS:SAAS00096235}; TaxID=577650 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfobulbus.;" source="Desulfobulbus propionicus (strain ATCC 33891 / DSM 2032 / 1pr3).;"
FFV18_Bp1_scaffold_649551_5
RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated, Acidobacteria, Bacteria

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comp(3437..4498)
DNA (1062bp) protein (354aa)
PilT protein-like protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IVA6_KORVE
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated
FFV18_Bp1_scaffold_649551_6
RBG_13_Deltaproteobacteria_61_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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5157..6767
DNA (1611bp) protein (537aa)
Protease IV id=1249928 bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria
Tax=RBG_13_Deltaproteobacteria_61_14_curated
FFV18_Bp1_scaffold_649551_7

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6846..6992
DNA (147bp) protein (49aa)
Marine sediment metagenome DNA, contig: S01H4_L03094 {ECO:0000313|EMBL:GAG58902.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
FFV18_Bp1_scaffold_649551_8
RIFOXYC1_FULL_Spirochaetes_54_7_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

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7023..7946
DNA (924bp) protein (308aa)
hypothetical protein n=1 Tax=Rhizobium meliloti RepID=UPI00037FCFD7
Tax=RIFOXYC1_FULL_Spirochaetes_54_7_curated
FFV18_Bp1_scaffold_649551_9
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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7943..9169
DNA (1227bp) protein (409aa)
N-6 DNA methylase n=1 Tax=Ochrobactrum intermedium 229E RepID=U4VEB5_9RHIZ
Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
FFV18_Bp1_scaffold_649551_10
Arcobacter butzleri, Arcobacter, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

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9399..10769
DNA (1371bp) protein (457aa)
Uncharacterized protein n=1 Tax=Arcobacter butzleri 7h1h RepID=S5PMW9_9PROT
Uncharacterized protein {ECO:0000313|EMBL:AGR76928.1}; TaxID=1036172 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Campylobacteraceae; Arcobacter.;" source="Arcobacter butzleri 7h1h.;"
FFV18_Bp1_scaffold_649551_11
unknown

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10772..11350
DNA (579bp) protein (193aa)

This feature has no annotations

FFV18_Bp1_scaffold_649551_12
Methanosarcina lacustris, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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11347..12141
DNA (795bp) protein (265aa)
Uncharacterized protein n=1 Tax=Methanosaeta concilii (strain ATCC 5969 / DSM 3671 / JCM 10134 / NBRC 103675 / OCM 69 / GP-6) RepID=F4BTW0_METCG
Putative cytoplasmic protein {ECO:0000313|EMBL:AKB74648.1}; TaxID=1434111 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina lacustris Z-7289.;"
FFV18_Bp1_scaffold_649551_13
CG_Cyano_02, Cyanobacteria, Bacteria

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12246..12656
DNA (411bp) protein (137aa)
Uncharacterized protein family UPF0310 n=1 Tax=Pseudanabaena biceps PCC 7429 RepID=L8MZF2_9CYAN
Tax=CG_Cyano_02
FFV18_Bp1_scaffold_649551_14
unknown

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12842..13102
DNA (261bp) protein (87aa)

This feature has no annotations

FFV18_Bp1_scaffold_649551_15
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

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comp(13391..14734)
DNA (1344bp) protein (448aa)
Uncharacterized protein n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MLM4_9BACT
Tax=RBG_16_Nitrospirae_64_22_curated
FFV18_Bp1_scaffold_649551_16
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(14825..16261)
DNA (1437bp) protein (479aa)
Microcin-processing peptidase 2 n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IH90_KORVE
Microcin-processing peptidase 2 {ECO:0000313|EMBL:ABF43760.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strain Ellin345).;"
FFV18_Bp1_scaffold_649551_17
Thermosinus carboxydivorans, Thermosinus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(16649..18265)
DNA (1617bp) protein (539aa)
Glycosyl transferase, family 39 n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HQC0_9FIRM
Glycosyl transferase, family 39 {ECO:0000313|EMBL:EAX47727.1}; Flags: Precursor;; TaxID=401526 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Thermosinus.;" source="Thermosinus carboxydivorans Nor1.;"
FFV18_Bp1_scaffold_649551_18
unknown

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comp(18272..18538)
DNA (267bp) protein (89aa)

This feature has no annotations

FFV18_Bp1_scaffold_649551_19
RBG_13_Nitrospirae_41_22_curated, Nitrospirae, Bacteria

Not on your lists

comp(18924..19232)
DNA (309bp) protein (103aa)
Putative integron gene cassette protein id=3814425 bin=GWF2_Lentisphaerae_38_69 species=uncultured bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Lentisphaerae_38_69 organism_group=Lentisphaerae organism_desc=a349
Tax=RBG_13_Nitrospirae_41_22_curated
FFV18_Bp1_scaffold_649551_20
RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(19640..19864)
DNA (225bp) protein (75aa)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated
FFV18_Bp1_scaffold_649551_21
Thioflavicoccus mobilis, Thioflavicoccus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19962..20795)
DNA (834bp) protein (278aa)
PDK repeat-containing protein n=1 Tax=Thioflavicoccus mobilis 8321 RepID=L0GX37_9GAMM
PDK repeat-containing protein {ECO:0000313|EMBL:AGA90526.1}; Flags: Precursor;; TaxID=765912 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thioflavicoccus.;" source="Thioflavicoccus mobilis 8321.;"
FFV18_Bp1_scaffold_649551_22
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(21610..22449)
DNA (840bp) protein (280aa)
HAD-superfamily hydrolase, subfamily IIB n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LGL1_CHLTF
HAD-superfamily hydrolase, subfamily IIB {ECO:0000313|EMBL:CDM65752.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
FFV18_Bp1_scaffold_649551_23
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(22485..23303)
DNA (819bp) protein (273aa)
Sec-independent protein translocase protein TatC n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=TATC_KORVE
Sec-independent protein translocase protein TatC {ECO:0000255|HAMAP-Rule:MF_00902}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strain Ellin345).;"
FFV18_Bp1_scaffold_649551_24
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(23300..23644)
DNA (345bp) protein (115aa)
sec-independent translocation protein mttA/Hcf106; K03116 sec-independent protein translocase protein TatA id=12555527 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
FFV18_Bp1_scaffold_649551_trna_2
unknown

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comp(23846..23935)
DNA (90bp)
transferRNA Ser
FFV18_Bp1_scaffold_649551_trna_1
unknown

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comp(23947..24031)
DNA (85bp)
transferRNA Ser
FFV18_Bp1_scaffold_649551_25
unknown

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24224..24364
DNA (141bp) protein (47aa)

This feature has no annotations

FFV18_Bp1_scaffold_649551_26
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

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24647..24832
DNA (186bp) protein (62aa)
glutaredoxin id=14626034 bin=bin7_NC10_sister species=Halococcus hamelinensis genus=Halococcus taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=bin7_NC10_sister organism_group=NC10
Tax=CSP1_6_Rokubacteria
FFV18_Bp1_scaffold_649551_27
RBG_19FT_COMBO_Nitrospirae_55_12_curated, Nitrospirae, Bacteria

Not on your lists

24995..26668
DNA (1674bp) protein (558aa)
Similar to ATP-dependent RNA helicase (RNA polymerase associated protein) id=4936593 bin=GWC2_Nitrospirae-rel_56_14 species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
Tax=RBG_19FT_COMBO_Nitrospirae_55_12_curated
Displaying 29 items

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