ggKbase home page

FM_L-1_scaffold_3062

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
FM_L-1_scaffold_3062_1
Coprococcus sp. HPP0074, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(37..546)
DNA (510bp) protein (170aa)
Anaerobic ribonucleoside-triphosphate reductase n=1 Tax=Coprococcus sp. HPP0074 RepID=S2YNZ3_9FIRM
Anaerobic ribonucleoside-triphosphate reductase {ECO:0000313|EMBL:EPD59247.1}; TaxID=1078090 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0074.;"
ribonucleoside-triphosphate reductase
FM_L-1_scaffold_3062_2
unknown

Not on your lists

comp(593..889)
DNA (297bp) protein (99aa)

This feature has no annotations

FM_L-1_scaffold_3062_3
unknown

Not on your lists

comp(968..1084)
DNA (117bp) protein (39aa)

This feature has no annotations

FM_L-1_scaffold_3062_4
Synechococcus phage S-CRM01, Caudovirales, Viruses

Not on your lists

comp(1360..2862)
DNA (1503bp) protein (501aa)
DNA primase / helicase n=1 Tax=Synechococcus phage S-CRM01 RepID=F5B408_9CAUD
DNA primase / helicase {ECO:0000313|EMBL:AEC53084.1}; TaxID=1026955 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Myoviridae.;" source="Synechococcus phage S-CRM01.;"
DnaB domain-containing protein helicase domain-containing protein
FM_L-1_scaffold_3062_5
Campylobacter subantarcticus, Campylobacter, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

4483..4662
DNA (180bp) protein (60aa)
hypothetical protein n=1 Tax=Brachyspira innocens RepID=UPI000361C2DE
hypothetical protein (DUF285 repeat domain)
Uncharacterized protein {ECO:0000313|EMBL:AJC90854.1}; TaxID=1388751 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Campylobacteraceae; Campylobacter.;" source="Campylobacter subantarcticus LMG 24374.;"
FM_L-1_scaffold_3062_6
unknown

Not on your lists

5016..5252
DNA (237bp) protein (79aa)

This feature has no annotations

FM_L-1_scaffold_3062_7
unknown

Not on your lists

comp(5949..6083)
DNA (135bp) protein (45aa)

This feature has no annotations

FM_L-1_scaffold_3062_8

Not on your lists

comp(6670..7080)
DNA (411bp) protein (137aa)
Transposase, IS605 OrfB family (Fragment) n=1 Tax=human gut metagenome RepID=K1S6X5_9ZZZZ
Transposase, IS605 OrfB family {ECO:0000313|EMBL:EKC53188.1}; Flags: Fragment;; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
transposase
FM_L-1_scaffold_3062_9
unknown

Not on your lists

comp(7332..7526)
DNA (195bp) protein (65aa)

This feature has no annotations

FM_L-1_scaffold_3062_10
unknown

Not on your lists

comp(7848..8381)
DNA (534bp) protein (178aa)

This feature has no annotations

FM_L-1_scaffold_3062_11
unknown

Not on your lists

comp(8387..8866)
DNA (480bp) protein (160aa)

This feature has no annotations

FM_L-1_scaffold_3062_12
unknown

Not on your lists

comp(8870..9106)
DNA (237bp) protein (79aa)

This feature has no annotations

FM_L-1_scaffold_3062_13
unknown

Not on your lists

comp(9109..9441)
DNA (333bp) protein (111aa)

This feature has no annotations

FM_L-1_scaffold_3062_14
unknown

Not on your lists

comp(9428..9712)
DNA (285bp) protein (95aa)

This feature has no annotations

FM_L-1_scaffold_3062_15
unknown

Not on your lists

9860..9949
DNA (90bp) protein (30aa)

This feature has no annotations

FM_L-1_scaffold_3062_16
Flavobacterium psychrophilum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

9933..10805
DNA (873bp) protein (291aa)
Probable cell surface protein (Leucine-rich repeat protein) n=1 Tax=Flavobacterium psychrophilum (strain JIP02/86 / ATCC 49511) RepID=A6GW11_FLAPJ
flavobacterium repeat protein
Flavobacterium repeat protein {ECO:0000313|EMBL:AIJ36680.1}; TaxID=96345 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium psychrophilum.;"
FM_L-1_scaffold_3062_17
unknown

Not on your lists

10899..12059
DNA (1161bp) protein (387aa)

This feature has no annotations

FM_L-1_scaffold_3062_18
unknown

Not on your lists

comp(12019..12177)
DNA (159bp) protein (53aa)

This feature has no annotations

FM_L-1_scaffold_3062_19
GWF2_Bacteroidetes_35_48_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12256..13407)
DNA (1152bp) protein (384aa)
Uncharacterized protein id=4395296 bin=GWF2_Bacteroidetes_35_48 species=unknown genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_35_48 organism_group=Bacteroidetes organism_desc=a81
ATPase family associated with various cellular activities (AAA).
Tax=GWF2_Bacteroidetes_35_48_curated
FM_L-1_scaffold_3062_20
unknown

Not on your lists

comp(13407..13823)
DNA (417bp) protein (139aa)

This feature has no annotations

FM_L-1_scaffold_3062_21
unknown

Not on your lists

comp(13839..13970)
DNA (132bp) protein (44aa)

This feature has no annotations

FM_L-1_scaffold_3062_22
unknown

Not on your lists

comp(13967..14134)
DNA (168bp) protein (56aa)

This feature has no annotations

FM_L-1_scaffold_3062_23
unknown

Not on your lists

comp(14140..14304)
DNA (165bp) protein (55aa)

This feature has no annotations

FM_L-1_scaffold_3062_24
unknown

Not on your lists

comp(14344..14775)
DNA (432bp) protein (144aa)

This feature has no annotations

FM_L-1_scaffold_3062_25
unknown

Not on your lists

comp(14772..15188)
DNA (417bp) protein (139aa)

This feature has no annotations

FM_L-1_scaffold_3062_26
Tannerella sp. CAG:51, Tannerella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15217..15894)
DNA (678bp) protein (226aa)
ATP-dependent Clp protease proteolytic subunit {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU003567}; EC=3.4.21.92 {ECO:0000256|HAMAP-Rule:MF_00444};; Endopeptidase Clp {ECO:0000256|HAMAP-Rule:MF_00444}; TaxID=1262979 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Tannerella; environmental samples.;" source="Tannerella sp. CAG:51.;"
Clp protease (EC:3.4.21.92)
ATP-dependent Clp protease proteolytic subunit n=3 Tax=Porphyromonadaceae RepID=G9S824_9PORP
FM_L-1_scaffold_3062_27
unknown

Not on your lists

comp(16091..16351)
DNA (261bp) protein (87aa)

This feature has no annotations

FM_L-1_scaffold_3062_28
Prevotella buccalis, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16415..17365)
DNA (951bp) protein (317aa)
Aspartate--ammonia ligase {ECO:0000256|HAMAP-Rule:MF_00555, ECO:0000256|SAAS:SAAS00088413}; EC=6.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00555, ECO:0000256|SAAS:SAAS00088403};; Asparagine synthetase A {ECO:0000256|HAMAP-Rule:MF_00555}; TaxID=679190 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella buccalis ATCC 35310.;"
aspartate/ammonia ligase (EC:6.3.1.1)
Aspartate--ammonia ligase n=1 Tax=Prevotella buccalis ATCC 35310 RepID=D1W8K6_9BACT
FM_L-1_scaffold_3062_29
unknown

Not on your lists

comp(17369..17530)
DNA (162bp) protein (54aa)

This feature has no annotations

FM_L-1_scaffold_3062_30
unknown

Not on your lists

comp(17539..17643)
DNA (105bp) protein (35aa)

This feature has no annotations

Displaying 30 items

View Taxonomy