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S0_scaffold_101_curated

Search features with annotation key words

Displaying items 1-30 of 270 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S0_scaffold_101_curated_1
unknown

Not on your lists

comp(1..171)
DNA (171bp) protein (57aa)

This feature has no annotations

S0_scaffold_101_curated_2
unknown

Not on your lists

266..451
DNA (186bp) protein (62aa)

This feature has no annotations

S0_scaffold_101_curated_3
GWC2_Geobacteraceae_55_20_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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448..3555
DNA (3108bp) protein (1036aa)
Cytochrome C family protein id=3764116 bin=GWC2_Geobacteraceae_55_20 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Geobacteraceae_55_20 organism_group=Deltaproteobacteria
hypothetical protein
Tax=GWC2_Geobacteraceae_55_20_curated
S0_scaffold_101_curated_4
GWC2_Geobacteraceae_55_20_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3730..5094
DNA (1365bp) protein (455aa)
Putative uncharacterized protein id=2284920 bin=GWB2_Geobacter-like_52_12 species=sediment metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB2_Geobacter-like_52_12 organism_group=Deltaproteobacteria organism_desc=Good rbh
hypothetical protein
Tax=GWC2_Geobacteraceae_55_20_curated
S0_scaffold_101_curated_5
GWD2_Desulfuromonadales_54_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5310..6239
DNA (930bp) protein (310aa)
ABC-type phosphate/phosphonate transport system periplasmic component-like protein id=1936671 bin=GWD2_Desulfuromonadales_54_10 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Desulfuromonadales_54_10 organism_group=Deltaproteobacteria rbh
phosphate/phosphonate ABC transporter periplasmic component-like protein rbh
Tax=GWD2_Desulfuromonadales_54_10_curated
S0_scaffold_101_curated_6
GWD2_Desulfuromonadales_54_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6244..6786
DNA (543bp) protein (181aa)
Putative uncharacterized protein id=1936673 bin=GWD2_Desulfuromonadales_54_10 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Desulfuromonadales_54_10 organism_group=Deltaproteobacteria rbh
hypothetical protein
Tax=GWD2_Desulfuromonadales_54_10_curated
S0_scaffold_101_curated_7
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6788..7852
DNA (1065bp) protein (355aa)
Putative uncharacterized protein id=1936675 bin=GWD2_Desulfuromonadales_54_10 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Desulfuromonadales_54_10 organism_group=Deltaproteobacteria rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ABQ26939.1}; Flags: Precursor;; TaxID=351605 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
S0_scaffold_101_curated_8
Geobacter lovleyi, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8068..8289
DNA (222bp) protein (74aa)
Uncharacterized protein n=1 Tax=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) RepID=B3EAC2_GEOLS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACD93950.1}; TaxID=398767 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ).;"
S0_scaffold_101_curated_9
Geobacter lovleyi, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8293..8748
DNA (456bp) protein (152aa)
Uncharacterized protein n=1 Tax=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) RepID=B3EAC3_GEOLS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACD93951.1}; TaxID=398767 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ).;"
S0_scaffold_101_curated_10
Geobacter lovleyi, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8748..9296
DNA (549bp) protein (183aa)
Hemerythrin HHE cation binding domain protein n=1 Tax=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) RepID=B3EAW8_GEOLS
hemerythrin HHE cation binding domain-containing protein
Hemerythrin HHE cation binding domain protein {ECO:0000313|EMBL:ACD93952.1}; TaxID=398767 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ).;"
S0_scaffold_101_curated_11
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9339..10544)
DNA (1206bp) protein (402aa)
ABC transporter, permease protein n=2 Tax=Pseudogulbenkiania RepID=G2IY94_PSEUL rbh
Multidrug ABC transporter substrate-binding protein {ECO:0000313|EMBL:GAO36372.1}; TaxID=1632857 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp. T08.;"
ABC transporter permease rbh
S0_scaffold_101_curated_12
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10544..11278)
DNA (735bp) protein (245aa)
ABC transporter related protein n=1 Tax=Pseudogulbenkiania ferrooxidans 2002 RepID=B9Z6S0_9NEIS rbh
Macrolide ABC transporter ATP-binding protein {ECO:0000313|EMBL:GAO36371.1}; TaxID=1632857 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp. T08.;"
ABC transporter ATP-binding protein rbh
S0_scaffold_101_curated_13
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11275..12585)
DNA (1311bp) protein (437aa)
RND efflux system, membrane fusion protein n=1 Tax=Pseudogulbenkiania sp. (strain NH8B) RepID=G2IY96_PSEUL rbh
RND transporter {ECO:0000313|EMBL:GAO36370.1}; TaxID=1632857 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp. T08.;"
RND efflux system membrane fusion protein rbh
S0_scaffold_101_curated_14
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12582..13976)
DNA (1395bp) protein (465aa)
RND efflux system, outer membrane lipoprotein n=1 Tax=Pseudogulbenkiania sp. (strain NH8B) RepID=G2IY97_PSEUL rbh
RND transporter {ECO:0000313|EMBL:GAO36369.1}; TaxID=1632857 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp. T08.;"
RND efflux system outer membrane lipoprotein rbh
S0_scaffold_101_curated_15
GWC2_Geobacteraceae_53_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14079..14621)
DNA (543bp) protein (181aa)
Uncharacterized protein id=3073186 bin=GWF2_Geobacter_54_21 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Geobacter_54_21 organism_group=Deltaproteobacteria organism_desc=Good
hypothetical protein
Tax=GWC2_Geobacteraceae_53_11_curated
S0_scaffold_101_curated_16
GWC2_Geobacteraceae_53_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14784..15719)
DNA (936bp) protein (312aa)
Signal transduction protein id=3015468 bin=GWF2_Geobacter_54_21 species=Pseudomonas sp. M47T1 genus=Pseudomonas taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF2_Geobacter_54_21 organism_group=Deltaproteobacteria organism_desc=Good
ef-hand, calmodulin
Tax=GWC2_Geobacteraceae_53_11_curated
S0_scaffold_101_curated_17
GWC2_Geobacteraceae_55_20_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15941..17362
DNA (1422bp) protein (474aa)
Integral membrane sensor signal transduction histidine kinase id=4161986 bin=GWC2_Geobacteraceae_55_20 species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Geobacteraceae_55_20 organism_group=Deltaproteobacteria rbh
integral membrane sensor signal transduction histidine kinase rbh
Tax=GWC2_Geobacteraceae_55_20_curated
S0_scaffold_101_curated_18
GWC2_Geobacteraceae_55_20_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17365..18042
DNA (678bp) protein (226aa)
Two component transcriptional regulator, winged helix family id=4161987 bin=GWC2_Geobacteraceae_55_20 species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Geobacteraceae_55_20 organism_group=Deltaproteobacteria rbh
two component transcriptional regulator rbh
Tax=GWC2_Geobacteraceae_55_20_curated
S0_scaffold_101_curated_19
GWB2_Geobacteraceae_52_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18090..18905)
DNA (816bp) protein (272aa)
Zinc/iron permease id=1982149 bin=GWD2_Desulfuromonadales_54_10 species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Desulfuromonadales_54_10 organism_group=Deltaproteobacteria rbh
zinc/iron permease rbh
Tax=GWB2_Geobacteraceae_52_12_curated
S0_scaffold_101_curated_20
Geobacter bemidjiensis, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19283..21130)
DNA (1848bp) protein (616aa)
Carbon starvation protein CstA n=1 Tax=Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622) RepID=B5ECV5_GEOBB rbh
Carbon starvation protein CstA {ECO:0000313|EMBL:ACH40572.1}; TaxID=404380 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622).;"
carbon starvation protein CstA rbh
S0_scaffold_101_curated_21
Oxalobacter formigenes, Oxalobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21175..22260)
DNA (1086bp) protein (362aa)
5-oxoprolinase (EC:3.5.2.9) rbh
Uncharacterized protein n=1 Tax=Oxalobacter formigenes HOxBLS RepID=C3X2F1_OXAFO rbh
Uncharacterized protein {ECO:0000313|EMBL:EEO27387.1}; TaxID=556268 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Oxalobacter.;" source="Oxalobacter formigenes HOxBLS.;"
S0_scaffold_101_curated_22
Chlorobium ferrooxidans, Chlorobium, Chlorobiales, Chlorobia, Chlorobi, Bacteria

Not on your lists

comp(22306..23592)
DNA (1287bp) protein (429aa)
Phosphatidylserine decarboxylase proenzyme {ECO:0000256|SAAS:SAAS00154492}; EC=4.1.1.65 {ECO:0000256|SAAS:SAAS00093350};; Flags: Precursor;; TaxID=377431 species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chlorobium/Pelodictyon group; Chlorobium.;" source="Chlorobium ferrooxidans DSM 13031.;"
Phosphatidylserine decarboxylase-related n=1 Tax=Chlorobium ferrooxidans DSM 13031 RepID=Q0YUS6_9CHLB rbh
phosphatidylserine decarboxylase rbh
S0_scaffold_101_curated_23
Methanosaeta concilii, Methanosaeta, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(23771..24886)
DNA (1116bp) protein (372aa)
ppaC; manganese-dependent inorganic pyrophosphatase (EC:3.6.1.1) rbh
Manganese-dependent inorganic pyrophosphatase {ECO:0000313|EMBL:AEB68486.1}; EC=3.6.1.1 {ECO:0000313|EMBL:AEB68486.1};; TaxID=990316 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosaetaceae; Methanosaeta.;" source="Methanosaeta concilii (strain ATCC 5969 / DSM 3671 / JCM 10134 / NBRC; 103675 / OCM 69 / GP-6) (Methanothrix concilii).;"
Manganese-dependent inorganic pyrophosphatase n=1 Tax=Methanosaeta concilii (strain ATCC 5969 / DSM 3671 / JCM 10134 / NBRC 103675 / OCM 69 / GP-6) RepID=F4BW56_METCG rbh
S0_scaffold_101_curated_24
GWC2_Geobacteraceae_55_20_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24998..25867)
DNA (870bp) protein (290aa)
Putative uncharacterized protein id=3583208 bin=GWF2_Geobacter_54_21 species=Geobacter lovleyi genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Geobacter_54_21 organism_group=Deltaproteobacteria organism_desc=Good
hypothetical protein
Tax=GWC2_Geobacteraceae_55_20_curated
S0_scaffold_101_curated_25
GWF2_Lentisphaerae_57_35_curated, Lentisphaerae, Bacteria

Not on your lists

comp(25879..27126)
DNA (1248bp) protein (416aa)
Pyridoxal-dependent decarboxylase id=4103645 bin=GWF2_Lentisphaerae_57_35 species=Oxalobacter formigenes genus=Oxalobacter taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459 rbh
histidine decarboxylase
Tax=GWF2_Lentisphaerae_57_35_curated
S0_scaffold_101_curated_26
Bacteroides intestinalis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27185..28837)
DNA (1653bp) protein (551aa)
Uncharacterized protein n=1 Tax=Bacteroides intestinalis DSM 17393 RepID=B3CDQ4_9BACE rbh
Uncharacterized protein {ECO:0000313|EMBL:EDV03208.1}; TaxID=471870 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides intestinalis DSM 17393.;"
S0_scaffold_101_curated_27
Geoalkalibacter ferrihydriticus, Geoalkalibacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28932..30359)
DNA (1428bp) protein (476aa)
5-methylthioadenosine/S-adenosylhomocysteine deaminase {ECO:0000256|HAMAP-Rule:MF_01281}; Short=MTA/SAH deaminase {ECO:0000256|HAMAP-Rule:MF_01281};; EC=3.5.4.28 {ECO:0000256|HAMAP-Rule:MF_01281};; EC=3.5.4.31 {ECO:0000256|HAMAP-Rule:MF_01281};; TaxID=1121915 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geoalkalibacter.;" source="Geoalkalibacter ferrihydriticus DSM 17813.;"
Putative uncharacterized protein id=1931779 bin=GWD2_Desulfuromonadales_54_10 species=uncultured archaeon genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Desulfuromonadales_54_10 organism_group=Deltaproteobacteria rbh
cytosine deaminase rbh
S0_scaffold_101_curated_28
Geobacter lovleyi, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30411..32180)
DNA (1770bp) protein (590aa)
Metallophosphoesterase id=1931780 bin=GWD2_Desulfuromonadales_54_10 species=Geobacter lovleyi genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Desulfuromonadales_54_10 organism_group=Deltaproteobacteria rbh
metallophosphoesterase rbh
Metallophosphoesterase {ECO:0000313|EMBL:ACD95743.1}; TaxID=398767 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ).;"
S0_scaffold_101_curated_29
GWC2_Geobacteraceae_53_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32302..33348)
DNA (1047bp) protein (349aa)
Uncharacterized protein n=1 Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=B9M4R5_GEODF
hypothetical protein
Tax=GWC2_Geobacteraceae_53_11_curated
S0_scaffold_101_curated_30
BJP_IG2069_Syntrophobacterales_46_30, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33585..34010)
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=Desulfovibrio sp. FW1012B RepID=G7Q8D3_9DELT
hypothetical protein
Tax=BJP_IG2069_Syntrophobacterales_46_30
Displaying items 1-30 of 270 in total

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