ggKbase home page

S0_scaffold_513_curated

Search features with annotation key words

Displaying 20 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S0_scaffold_513_curated_1
GWD2_Desulfuromonadales_54_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..207
DNA (207bp) protein (69aa)
Putative uncharacterized protein id=2274794 bin=GWB2_Pelobacter_53_15 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Pelobacter_53_15 organism_group=Deltaproteobacteria organism_desc=Good
hypothetical protein
Tax=GWD2_Desulfuromonadales_54_10_curated
S0_scaffold_513_curated_2
Pelobacter propionicus, Pelobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

395..658
DNA (264bp) protein (88aa)
Putative uncharacterized protein id=1750925 bin=GWB2_Geobacter-like_52_12 species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Geobacter-like_52_12 organism_group=Deltaproteobacteria organism_desc=Good
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABK99261.1}; TaxID=338966 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Pelobacteraceae; Pelobacter.;" source="Pelobacter propionicus (strain DSM 2379).;"
S0_scaffold_513_curated_3

Not on your lists

880..1611
DNA (732bp) protein (244aa)
Uncharacterized protein (Fragment) n=1 Tax=uncultured bacterium RepID=K1ZMH6_9BACT rbh
Uncharacterized protein {ECO:0000313|EMBL:EKD50937.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
S0_scaffold_513_curated_4
BJP_IG2157_Desulfuromonadales_56_134, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1674..2759)
DNA (1086bp) protein (362aa)
Alanine dehydrogenase n=1 Tax=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) RepID=B3E8N4_GEOLS rbh
alanine dehydrogenase rbh
Tax=BJP_IG2157_Desulfuromonadales_56_134
S0_scaffold_513_curated_5

Not on your lists

comp(2901..3194)
DNA (294bp) protein (98aa)
Cytochrome c3 n=1 Tax=uncultured bacterium RepID=K1ZP70_9BACT
Cytochrome c3 {ECO:0000313|EMBL:EKD50936.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
cytochrome c3
S0_scaffold_513_curated_6
GWD2_Desulfuromonadales_54_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3381..5426
DNA (2046bp) protein (682aa)
UvrD/REP helicase id=2070201 bin=GWB2_Pelobacter_53_15 species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Pelobacter_53_15 organism_group=Deltaproteobacteria organism_desc=Good rbh
UvrD/REP helicase rbh
Tax=GWD2_Desulfuromonadales_54_10_curated
S0_scaffold_513_curated_7
Geobacter lovleyi, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5443..5856)
DNA (414bp) protein (138aa)
Response regulator receiver protein n=1 Tax=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) RepID=B3EA46_GEOLS
response regulator receiver protein
Response regulator receiver protein {ECO:0000313|EMBL:ACD93874.1}; TaxID=398767 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ).;"
S0_scaffold_513_curated_8
GWC2_Geobacteraceae_55_20_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5857..8328)
DNA (2472bp) protein (824aa)
PAS/PAC sensor signal transduction histidine kinase id=4659302 bin=GWF2_Geobacter_54_21 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Geobacter_54_21 organism_group=Deltaproteobacteria organism_desc=Good rbh
PAS/PAC sensor signal transduction histidine kinase rbh
Tax=GWC2_Geobacteraceae_55_20_curated
S0_scaffold_513_curated_9

Not on your lists

comp(8279..9316)
DNA (1038bp) protein (346aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1YV20_9BACT rbh
Uncharacterized protein {ECO:0000313|EMBL:EKD36413.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
NMT1/THI5 like domain-containing protein rbh
S0_scaffold_513_curated_10
GWC2_Geobacteraceae_55_20_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9392..10135)
DNA (744bp) protein (248aa)
ResB-like family cytochrome c biogenesis protein id=2070199 bin=GWB2_Pelobacter_53_15 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Pelobacter_53_15 organism_group=Deltaproteobacteria organism_desc=Good rbh
ResB-like family cytochrome c biogenesis protein
Tax=GWC2_Geobacteraceae_55_20_curated
S0_scaffold_513_curated_11
GWD2_Desulfuromonadales_54_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10137..10856)
DNA (720bp) protein (240aa)
ResC/HemX-like cytochrome c biogenesis membrane protein id=2070197 bin=GWB2_Pelobacter_53_15 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Pelobacter_53_15 organism_group=Deltaproteobacteria organism_desc=Good rbh
ResC/HemX-like cytochrome c biogenesis membrane protein rbh
Tax=GWD2_Desulfuromonadales_54_10_curated
S0_scaffold_513_curated_12
GWC2_Geobacteraceae_53_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10987..11640)
DNA (654bp) protein (218aa)
Surface antigen msp4 family protein id=2132816 bin=GWB2_Pelobacter_53_15 species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Pelobacter_53_15 organism_group=Deltaproteobacteria organism_desc=Good rbh
surface antigen msp4 family protein
Tax=GWC2_Geobacteraceae_53_11_curated
S0_scaffold_513_curated_13
GWD2_Desulfuromonadales_54_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11675..12832)
DNA (1158bp) protein (386aa)
LigC protein id=2132814 bin=GWB2_Pelobacter_53_15 species=Stigmatella aurantiaca genus=Stigmatella taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Pelobacter_53_15 organism_group=Deltaproteobacteria organism_desc=Good rbh
LigC protein
Tax=GWD2_Desulfuromonadales_54_10_curated
S0_scaffold_513_curated_14
GWC2_Geobacteraceae_55_20_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13068..15143
DNA (2076bp) protein (692aa)
Putative uncharacterized protein id=2070195 bin=GWB2_Pelobacter_53_15 species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Pelobacter_53_15 organism_group=Deltaproteobacteria organism_desc=Good rbh
hypothetical protein rbh
Tax=GWC2_Geobacteraceae_55_20_curated
S0_scaffold_513_curated_15
GWD2_Desulfuromonadales_54_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15135..16193)
DNA (1059bp) protein (353aa)
UDP-3-O-acylglucosamine N-acyltransferase id=2070191 bin=GWB2_Pelobacter_53_15 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Pelobacter_53_15 organism_group=Deltaproteobacteria organism_desc=Good rbh
lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase
Tax=GWD2_Desulfuromonadales_54_10_curated
S0_scaffold_513_curated_16
Geobacter lovleyi, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16502..17191
DNA (690bp) protein (230aa)
Molybdate ABC transporter, inner membrane subunit n=1 Tax=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) RepID=B3E2C6_GEOLS rbh
molybdate ABC transporter inner membrane subunit rbh
Molybdate ABC transporter, inner membrane subunit {ECO:0000313|EMBL:ACD94179.1}; TaxID=398767 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ).;"
S0_scaffold_513_curated_17
Pelobacter propionicus, Pelobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17191..18279
DNA (1089bp) protein (363aa)
Molybdate-transporting ATPase {ECO:0000256|SAAS:SAAS00055222}; EC=3.6.3.29 {ECO:0000256|SAAS:SAAS00055222};; TaxID=338966 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Pelobacteraceae; Pelobacter.;" source="Pelobacter propionicus (strain DSM 2379).;"
Molybdate ABC transporter, ATPase subunit n=1 Tax=Pelobacter propionicus (strain DSM 2379) RepID=A1AP03_PELPD rbh
molybdate ABC transporter ATPase rbh
S0_scaffold_513_curated_18
GWD2_Desulfuromonadales_54_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18336..19217
DNA (882bp) protein (294aa)
Pseudouridine synthase id=2070186 bin=GWB2_Pelobacter_53_15 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Pelobacter_53_15 organism_group=Deltaproteobacteria organism_desc=Good rbh
pseudouridine synthase rbh
Tax=GWD2_Desulfuromonadales_54_10_curated
S0_scaffold_513_curated_19
unknown

Not on your lists

comp(19363..20127)
DNA (765bp) protein (255aa)

This feature has no annotations

S0_scaffold_513_curated_20
CG_Desulfob_01, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20477..21070)
DNA (594bp) protein (198aa)
Tax=CG_Desulfob_01
Displaying 20 items

View Taxonomy