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S0_scaffold_617_curated

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Displaying 14 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S0_scaffold_617_curated_1
Echinicola vietnamensis, Echinicola, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(17..640)
DNA (624bp) protein (208aa)
Uncharacterized protein n=1 Tax=Echinicola vietnamensis (strain DSM 17526 / LMG 23754 / KMM 6221) RepID=L0FY88_ECHVK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA78884.1}; TaxID=926556 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Echinicola.;" source="Echinicola vietnamensis (strain DSM 17526 / LMG 23754 / KMM 6221).;"
S0_scaffold_617_curated_2
GWC2_Geobacteraceae_53_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1207..2499)
DNA (1293bp) protein (431aa)
Histidinol dehydrogenase id=4942809 bin=GWC2_Geobacteraceae_55_20 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Geobacteraceae_55_20 organism_group=Deltaproteobacteria rbh
histidinol dehydrogenase
Tax=GWC2_Geobacteraceae_53_11_curated
S0_scaffold_617_curated_3
GWC2_Geobacteraceae_55_20_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2560..3081)
DNA (522bp) protein (174aa)
id=4343510 bin=GWF2_Geobacter_54_21 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Geobacter_54_21 organism_group=Deltaproteobacteria organism_desc=Good
hypothetical protein
Tax=GWC2_Geobacteraceae_55_20_curated
S0_scaffold_617_curated_4
GWC2_Geobacteraceae_55_20_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3101..3739)
DNA (639bp) protein (213aa)
ATP phosphoribosyltransferase id=4942780 bin=GWC2_Geobacteraceae_55_20 species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Geobacteraceae_55_20 organism_group=Deltaproteobacteria rbh
hisG; ATP phosphoribosyltransferase catalytic subunit rbh
Tax=GWC2_Geobacteraceae_55_20_curated
S0_scaffold_617_curated_5
GWC2_Geobacteraceae_55_20_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3901..5154)
DNA (1254bp) protein (418aa)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase id=4343508 bin=GWF2_Geobacter_54_21 species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Geobacter_54_21 organism_group=Deltaproteobacteria organism_desc=Good rbh
UDP-N-acetylglucosamine 1-carboxyvinyltransferase rbh
Tax=GWC2_Geobacteraceae_55_20_curated
S0_scaffold_617_curated_6
GWD2_Desulfuromonadales_54_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5410..8586
DNA (3177bp) protein (1059aa)
Multi-sensor hybrid histidine kinase id=1967796 bin=GWB2_Pelobacter_53_15 species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Pelobacter_53_15 organism_group=Deltaproteobacteria organism_desc=Good rbh
multi-sensor hybrid histidine kinase rbh
Tax=GWD2_Desulfuromonadales_54_10_curated
S0_scaffold_617_curated_7
GWC2_Geobacteraceae_55_20_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8576..9649
DNA (1074bp) protein (358aa)
Response regulator receiver modulated metal dependent phosphohydrolase id=2062341 bin=GWD2_Desulfuromonadales_54_10 species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Desulfuromonadales_54_10 organism_group=Deltaproteobacteria rbh
response regulator receiver modulated metal dependent phosphohydrolase rbh
Tax=GWC2_Geobacteraceae_55_20_curated
S0_scaffold_617_curated_8
GWC2_Geobacteraceae_55_20_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9686..12058)
DNA (2373bp) protein (791aa)
trifunctional NADH dehydrogenase I subunit B/C/D (EC:1.6.99.5) rbh
NADH-quinone oxidoreductase subunit B/C/D id=2062342 bin=GWD2_Desulfuromonadales_54_10 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Desulfuromonadales_54_10 organism_group=Deltaproteobacteria rbh
Tax=GWC2_Geobacteraceae_55_20_curated
S0_scaffold_617_curated_9
GWC2_Geobacteraceae_55_20_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12145..12564)
DNA (420bp) protein (140aa)
NADH-quinone oxidoreductase subunit A 1 id=1967793 bin=GWB2_Pelobacter_53_15 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Pelobacter_53_15 organism_group=Deltaproteobacteria organism_desc=Good
nuoA-2; NADH dehydrogenase I subunit A
Tax=GWC2_Geobacteraceae_55_20_curated
S0_scaffold_617_curated_10
GWC2_Geobacteraceae_55_20_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12634..13389)
DNA (756bp) protein (252aa)
Cobalt ABC transporter, ATPase subunit id=3710168 bin=GWF2_Geobacter_54_21 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Geobacter_54_21 organism_group=Deltaproteobacteria organism_desc=Good rbh
cobalt ABC transporter ATPase rbh
Tax=GWC2_Geobacteraceae_55_20_curated
S0_scaffold_617_curated_11
GWC2_Geobacteraceae_55_20_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13386..14198)
DNA (813bp) protein (271aa)
Cobalt ABC transporter, inner membrane subunit CbiQ id=4316990 bin=GWC2_Geobacteraceae_55_20 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Geobacteraceae_55_20 organism_group=Deltaproteobacteria rbh
cobalt ABC transporter inner membrane protein CbiQ rbh
Tax=GWC2_Geobacteraceae_55_20_curated
S0_scaffold_617_curated_12
GWC2_Geobacteraceae_53_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14364..15446)
DNA (1083bp) protein (361aa)
Cobalamin (Vitamin B12) biosynthesis CbiM protein n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GBP9_GEOUR rbh
cobalamin (vitamin B12) biosynthesis CbiM protein rbh
Tax=GWC2_Geobacteraceae_53_11_curated
S0_scaffold_617_curated_13
GWC2_Geobacteraceae_55_20_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15659..16075
DNA (417bp) protein (139aa)
Putative nickel-responsive regulator id=4622495 bin=GWC2_Geobacteraceae_55_20 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Geobacteraceae_55_20 organism_group=Deltaproteobacteria
nickel responsive regulator
Tax=GWC2_Geobacteraceae_55_20_curated
S0_scaffold_617_curated_14
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16183..17529)
DNA (1347bp) protein (449aa)
hypothetical protein n=1 Tax=Methylobacter marinus RepID=UPI000369E7D8 rbh
Uncharacterized protein {ECO:0000313|EMBL:CCU61550.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
type 12 methyltransferase rbh
Displaying 14 items

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